Literature DB >> 10826556

Mapping of quantitative trait loci (QTL) of differential stress gene expression in rat recombinant inbred strains.

P Dumas1, Y Sun, G Corbeil, S Tremblay, Z Pausova, V Kren, D Krenova, M Pravenec, P Hamet, J Tremblay.   

Abstract

OBJECTIVE: Stress has been shown to be a major environmental contributor to cardiovascular diseases through its effects on blood pressure variability and cardiac function. The cellular stress response is characterized by the expression of specific heat stress genes (hsps), under the transcriptional control of heat shock transcription factors (HSTFs). The levels of hsp mRNA depend on the severity of the stress, with hstf1 acting as a stress sensor. The aim of this work was to evaluate the genetic contribution of the variability in hsp expression, and to identify its putative quantitative trait loci (QTL).
METHODS: Twenty recombinant inbred rat strains (RIS) were studied. The animals underwent a standardized, identical 1 h immobilization stress in restraint cages, followed by 1 h of rest before sacrifice. Total RNA was extracted from the heart kidneys and adrenals, and the mRNA levels of hsp27, hsp70, hsp84, hsp86 and hsp105 were measured. The strain distribution pattern (SDP) of hsp expression was correlated with that of 475 polymorphic markers distributed throughout the RIS genome. A polymorphism of rat hstf1 in RIS was used for its mapping in RIS.
RESULTS: Despite an identical stress being applied to all strains, hsp expression showed up to a 1 2-fold gradient with little intra-strain variability, indicative of a strong genetic contribution to the trait Heritability ranged from 50 to 77% for most hsp genes in the three target organs. The continuous SDP of stress gene expression indicated the polygenic nature of the trait A common locus on chromosome 7 (at D7Cebrp187s3 marker) was consistently associated with all hsp expression in most of the organs [with a likelihood of odds (LOD) score of 3.0 for hsp27 expression]. We have mapped rat hstf1 on chromosome 7 at the same locus. Finally, the D4Mit19 marker was significantly associated with hsp84 expression in the heart (LOD score of 3.1).
CONCLUSION: Two loci were linked with the differential expression of HSPs in response to immobilization stress in target organs of RIS. The chromosome 7 locus unveiled for all HSPs could explain up to 42% of the observed inter-strain variability of hsp levels in response to stress. We propose hstf1 as a positional candidate at this locus.

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Year:  2000        PMID: 10826556     DOI: 10.1097/00004872-200018050-00006

Source DB:  PubMed          Journal:  J Hypertens        ISSN: 0263-6352            Impact factor:   4.844


  9 in total

1.  A new framework marker-based linkage map and SDPs for the rat HXB/BXH strain set.

Authors:  Martin Jirout; Drahomíra Krenová; Vladimír Kren; Laura Breen; Michal Pravenec; Nicholas J Schork; Morton P Printz
Journal:  Mamm Genome       Date:  2003-08       Impact factor: 2.957

2.  Combining gene expression and molecular marker information for mapping complex trait genes: a simulation study.

Authors:  Miguel Pérez-Enciso; Miguel A Toro; Michel Tenenhaus; Daniel Gianola
Journal:  Genetics       Date:  2003-08       Impact factor: 4.562

3.  A large-sample QTL study in mice: II. Body composition.

Authors:  Joao L Rocha; Eugene J Eisen; L Dale Van Vleck; Daniel Pomp
Journal:  Mamm Genome       Date:  2004-02       Impact factor: 2.957

4.  Genetic architecture of transcript-level variation in differentiating xylem of a eucalyptus hybrid.

Authors:  Matias Kirst; Christopher J Basten; Alexander A Myburg; Zhao-Bang Zeng; Ronald R Sederoff
Journal:  Genetics       Date:  2005-01-31       Impact factor: 4.562

5.  Sex and heredity are determinants of drug intake in a novel model of rat oral oxycodone self-administration.

Authors:  Burt M Sharp; Xinyu Fan; Eva E Redei; Megan K Mulligan; Hao Chen
Journal:  Genes Brain Behav       Date:  2021-09-16       Impact factor: 3.449

6.  Dimension reduction for mapping mRNA abundance as quantitative traits.

Authors:  Hong Lan; Jonathan P Stoehr; Samuel T Nadler; Kathryn L Schueler; Brian S Yandell; Alan D Attie
Journal:  Genetics       Date:  2003-08       Impact factor: 4.562

7.  Genetic determinants of HSP70 gene expression following heat shock.

Authors:  Narelle Maugeri; Jayachandran Radhakrishnan; Julian C Knight
Journal:  Hum Mol Genet       Date:  2010-09-27       Impact factor: 6.150

Review 8.  Integrated gene expression profiling and linkage analysis in the rat.

Authors:  Enrico Petretto; Jonathan Mangion; Michal Pravanec; Norbert Hubner; Timothy J Aitman
Journal:  Mamm Genome       Date:  2006-06-12       Impact factor: 2.957

9.  Trait correlated expression combined with expression QTL analysis reveals biological pathways and candidate genes affecting water holding capacity of muscle.

Authors:  Siriluck Ponsuksili; Elisabeth Jonas; Eduard Murani; Chirawath Phatsara; Tiranun Srikanchai; Christina Walz; Manfred Schwerin; Karl Schellander; Klaus Wimmers
Journal:  BMC Genomics       Date:  2008-07-31       Impact factor: 3.969

  9 in total

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