Literature DB >> 10819966

Side-chain interactions in the plastocyanin-cytochrome f complex.

M Ejdebäck1, A Bergkvist, B G Karlsson, M Ubbink.   

Abstract

Cytochrome f and plastocyanin are redox partners in the photosynthetic electron-transfer chain. Electron transfer from cytochrome f to plastocyanin occurs in a specific short-lived complex. To obtain detailed information about the binding interface in this transient complex, the effects of binding on the backbone and side-chain protons of plastocyanin have been analyzed by mapping NMR chemical-shift changes. Cytochrome f was added to plastocyanin up to 0.3 M equiv, and the plastocyanin proton chemical shifts were measured. Out of approximately 500 proton resonances, 86% could be observed with this method. Nineteen percent demonstrate significant chemical-shift changes and these protons are located in the hydrophobic patch (including the copper ligands) and the acidic patches of plastocyanin, demonstrating that both areas are part of the interface in the complex. This is consistent with the recently determined structure of the complex [Ubbink, M., Ejdebäck, M., Karlsson, B. G., and Bendall, D. S. (1998) Structure 6, 323-335]. The largest chemical-shift changes are found around His87 in the hydrophobic patch, which indicates tight contacts and possibly water exclusion from this part of the protein interface. These results support the idea that electron transfer occurs via His87 to the copper in plastocyanin and suggest that the hydrophobic patch determines the specificity of the binding. The chemical-shift changes in the acidic patches are significant but small, suggesting that the acidic groups are involved in electrostatic interactions but remain solvent exposed. The existence of small differences between the present data and those used for the structure may imply that the redox state of the metals in both proteins slightly affects the structure of the complex. The chemical-shift mapping is performed on unlabeled proteins, making it an efficient way to analyze effects of mutations on the structure of the complex.

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Year:  2000        PMID: 10819966     DOI: 10.1021/bi992757c

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Surface interactions in the complex between cytochrome f and the E43Q/D44N and E59K/E60Q plastocyanin double mutants as determined by (1)H-NMR chemical shift analysis.

Authors:  A Bergkvist; M Ejdebäck; M Ubbink; B G Karlsson
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

2.  Electrostatic analysis and Brownian dynamics simulation of the association of plastocyanin and cytochrome f.

Authors:  F De Rienzo; R R Gabdoulline; M C Menziani; P G De Benedetti; R C Wade
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

3.  Theoretical descriptors for the quantitative rationalisation of plastocyanin mutant functional propertiess.

Authors:  F De Rienzo; G H Grant; M C Menziani
Journal:  J Comput Aided Mol Des       Date:  2002-07       Impact factor: 3.686

4.  The parsley plastocyanin-turnip cytochrome f complex: a structurally distorted but kinetically functional acidic patch.

Authors:  Peter B Crowley; David M Hunter; Katsuko Sato; William McFarlane; Christopher Dennison
Journal:  Biochem J       Date:  2004-02-15       Impact factor: 3.857

5.  A comparative structural and functional analysis of cyanobacterial plastocyanin and cytochrome c (6) as alternative electron donors to Photosystem I.

Authors:  Antonio Díaz-Quintana; José A Navarro; Manuel Hervás; Fernando P Molina-Heredia; Berta De la Cerda; Miguel A De la Rosa
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

6.  NMR of redox proteins of plants, yeasts and photosynthetic bacteria.

Authors:  Xavier Trivelli; Sandrine Bouillac; Pascale Tsan; Isabelle Krimm; Jean-Marc Lancelin
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

7.  Complexes of photosynthetic redox proteins studied by NMR.

Authors:  Marcellus Ubbink
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

8.  A Brownian Dynamics computational study of the interaction of spinach plastocyanin with turnip cytochrome f: the importance of plastocyanin conformational changes.

Authors:  Elizabeth L Gross
Journal:  Photosynth Res       Date:  2007-10-31       Impact factor: 3.573

9.  Electron transfer from cytochrome c to cupredoxins.

Authors:  Shin-ichi J Takayama; Kiyofumi Irie; Hulin Tai; Takumi Kawahara; Shun Hirota; Teruhiro Takabe; Luis A Alcaraz; Antonio Donaire; Yasuhiko Yamamoto
Journal:  J Biol Inorg Chem       Date:  2009-03-18       Impact factor: 3.358

10.  Brownian dynamics simulations of the interaction of Chlamydomonas cytochrome f with plastocyanin and cytochrome c6.

Authors:  Elizabeth L Gross; Douglas C Pearson
Journal:  Biophys J       Date:  2003-09       Impact factor: 4.033

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