Literature DB >> 10813396

Transcriptional augmentation: modulation of gene expression by scaffold/matrix-attached regions (S/MAR elements).

J Bode1, C Benham, A Knopp, C Mielke.   

Abstract

For a long time S/MARs could only be characterized by the assays in vitro that led to their detection. Only recently a number of biological activities emerged that are common to most or all S/MARs that are detected by the classic procedures. This review focuses on the phenomenon of transcriptional augmentation that is found for genomically anchored or episomal genes and on a group of partially overlapping activities that are suited to maintain an episomal status. Further, it is attempted to correlate properties of the S/MAR-scaffold interaction with prominent or prototype protein binding partners.

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Year:  2000        PMID: 10813396

Source DB:  PubMed          Journal:  Crit Rev Eukaryot Gene Expr        ISSN: 1045-4403            Impact factor:   1.807


  62 in total

1.  In silico prediction of scaffold/matrix attachment regions in large genomic sequences.

Authors:  Matthias Frisch; Kornelie Frech; Andreas Klingenhoff; Kerstin Cartharius; Ines Liebich; Thomas Werner
Journal:  Genome Res       Date:  2002-02       Impact factor: 9.043

2.  An episomally replicating vector binds to the nuclear matrix protein SAF-A in vivo.

Authors:  Bok Hee C Jenke; Christian P Fetzer; Isa M Stehle; Franziska Jönsson; Frank O Fackelmayer; Harald Conradt; Jürgen Bode; Hans J Lipps
Journal:  EMBO Rep       Date:  2002-03-15       Impact factor: 8.807

3.  Scaffold/matrix attachment region elements interact with a p300-scaffold attachment factor A complex and are bound by acetylated nucleosomes.

Authors:  Joost H A Martens; Matty Verlaan; Eric Kalkhoven; Josephine C Dorsman; Alt Zantema
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

Review 4.  In silico identification of metazoan transcriptional regulatory regions.

Authors:  Wyeth W Wasserman; William Krivan
Journal:  Naturwissenschaften       Date:  2003-03-27

Review 5.  Nanoparticles for retinal gene therapy.

Authors:  Shannon M Conley; Muna I Naash
Journal:  Prog Retin Eye Res       Date:  2010-05-07       Impact factor: 21.198

6.  The c-myc insulator element and matrix attachment regions define the c-myc chromosomal domain.

Authors:  Wendy M Gombert; Stephen D Farris; Eric D Rubio; Kristin M Morey-Rosler; William H Schubach; Anton Krumm
Journal:  Mol Cell Biol       Date:  2003-12       Impact factor: 4.272

7.  SUMO modification of a novel MAR-binding protein, SATB2, modulates immunoglobulin mu gene expression.

Authors:  Gergana Dobreva; Julia Dambacher; Rudolf Grosschedl
Journal:  Genes Dev       Date:  2003-12-15       Impact factor: 11.361

Review 8.  Minimizing the unpredictability of transgene expression in plants: the role of genetic insulators.

Authors:  Stacy D Singer; Zongrang Liu; Kerik D Cox
Journal:  Plant Cell Rep       Date:  2011-10-11       Impact factor: 4.570

9.  Performance of genomic bordering elements at predefined genomic loci.

Authors:  Sandra Goetze; Alexandra Baer; Silke Winkelmann; Kristina Nehlsen; Jost Seibler; Karin Maass; Jürgen Bode
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

Review 10.  The genome and the nucleus: a marriage made by evolution. Genome organisation and nuclear architecture.

Authors:  Helen A Foster; Joanna M Bridger
Journal:  Chromosoma       Date:  2005-10-15       Impact factor: 4.316

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