Literature DB >> 10811802

A metal bridge between two enzyme families. 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus requires a divalent metal for activity.

H S Duewel1, R W Woodard.   

Abstract

The enzymes 3-deoxy-d-manno-octulosonic acid-8-phosphate synthase (KDO8PS) and 3-deoxy-d-arabino-heptulosonic acid-7-phosphate synthase (DAHPS) catalyze analogous condensation reactions between phosphoenolpyruvate and d-arabinose 5-phosphate or d-erythrose 4-phosphate, respectively. While several similarities exist between the two enzymatic reactions, classic studies on the Escherichia coli enzymes have established that DAHPS is a metalloenzyme, whereas KDO8PS has no metal requirement. Here, we demonstrate that KDO8PS from Aquifex aeolicus, representing only the second member of the KDO8PS family to be characterized in detail, is a metalloenzyme. The recombinant KDO8PS, as isolated, displays an absorption band at 505 nm and contains approximately 0.4 and 0.2-0.3 eq of zinc and iron, respectively, per enzyme subunit. EDTA inactivates the enzyme in a time- and concentration-dependent manner and eliminates the absorption at 505 nm. The addition of Cu(2+) to KDO8PS produces an intense absorption at 375 nm, while neither Co(2+) nor Ni(2+) produce such an effect. The EDTA-treated enzyme is reactivated by a wide range of divalent metal ions including Ca(2+), Cd(2+), Co(2+), Cu(2+), Fe(2+), Mg(2+), Mn(2+), Ni(2+), and Zn(2+) and is reversibly inhibited by higher concentrations (>1 mm) of certain metals. Analysis of several metal forms of the enzyme by plasma mass spectrometry suggests that the enzyme preferentially binds one, two, or four metal ions per tetramer. These observations strongly suggest that A. aeolicus KDO8PS is a metalloenzyme in vivo and point to a previously unrecognized relationship between the KDO8PS and DAHPS families.

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Year:  2000        PMID: 10811802     DOI: 10.1074/jbc.M000133200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  Observation of a chemically labile, noncovalent enzyme intermediate in the reaction of metal-dependent Aquifex pyrophilus KDO8PS by time-resolved mass spectrometry.

Authors:  Anne Roberts; Cristina Furdui; Karen S Anderson
Journal:  Rapid Commun Mass Spectrom       Date:  2010-07-15       Impact factor: 2.419

2.  The catalytic and conformational cycle of Aquifex aeolicus KDO8P synthase: role of the L7 loop.

Authors:  Xingjue Xu; Fathima Kona; Jian Wang; Jinshuang Lu; Timothy Stemmler; Domenico L Gatti
Journal:  Biochemistry       Date:  2005-09-20       Impact factor: 3.162

3.  Bacillus subtilis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase revisited: resolution of two long-standing enigmas.

Authors:  Jing Wu; Galina Ya Sheflyan; Ronald W Woodard
Journal:  Biochem J       Date:  2005-09-01       Impact factor: 3.857

4.  Purification and characterization of dimethylsulfide monooxygenase from Hyphomicrobium sulfonivorans.

Authors:  Rich Boden; Elena Borodina; Ann P Wood; Donovan P Kelly; J Colin Murrell; Hendrik Schäfer
Journal:  J Bacteriol       Date:  2011-01-07       Impact factor: 3.490

5.  Common basis for the mechanism of metallo and non-metallo KDO8P synthases.

Authors:  Peng Tao; H Bernhard Schlegel; Domenico L Gatti
Journal:  J Inorg Biochem       Date:  2010-08-19       Impact factor: 4.155

6.  Functional and biochemical characterization of a recombinant Arabidopsis thaliana 3-deoxy-D-manno-octulosonate 8-phosphate synthase.

Authors:  Jing Wu; Mayur A Patel; Appavu K Sundaram; Ronald W Woodard
Journal:  Biochem J       Date:  2004-07-01       Impact factor: 3.857

7.  Cloning, expression, and biochemical characterization of 3-deoxy-D-manno-2-octulosonate-8-phosphate (KDO8P) synthase from the hyperthermophilic bacterium Aquifex pyrophilus.

Authors:  Smadar Shulami; Orit Yaniv; Emilia Rabkin; Yuval Shoham; Timor Baasov
Journal:  Extremophiles       Date:  2003-08-29       Impact factor: 2.395

8.  Structure of a metal-independent bacterial glycosyltransferase that catalyzes the synthesis of histo-blood group A antigen.

Authors:  Nethaji Thiyagarajan; Tram T K Pham; Brittany Stinson; Amit Sundriyal; Percy Tumbale; Michelle Lizotte-Waniewski; Keith Brew; K Ravi Acharya
Journal:  Sci Rep       Date:  2012-12-07       Impact factor: 4.379

9.  The contribution of coevolving residues to the stability of KDO8P synthase.

Authors:  Sharon H Ackerman; Domenico L Gatti
Journal:  PLoS One       Date:  2011-03-09       Impact factor: 3.240

10.  MliR, a novel MerR-like regulator of iron homeostasis, impacts metabolism, membrane remodeling, and cell adhesion in the marine Bacteroidetes Bizionia argentinensis.

Authors:  Leonardo Pellizza; Magalí G Bialer; Rodrigo Sieira; Martín Aran
Journal:  Front Microbiol       Date:  2022-09-02       Impact factor: 6.064

  10 in total

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