Literature DB >> 10797607

Availability of Nagarse for DNA analysis as a substitute for proteinase K.

M Yokota1, I Tsuda, N Tatsumi.   

Abstract

The availability of Nagarse, a protease, as a substitute for proteinase K for digestion of leukocytic or bacterial DNAs was studied. The amount and purity of DNAs extracted from leukocytes and several bacterial strains with Nagarse were compared with those of DNAs treated with proteinase. Nagarse exhibited the same behavior as proteinase K in digesting leukocytes, and it could also be used for bacterial digestion for physical mapping of genomic DNA by biased sinusoid field gel electrophoresis. Nagarse was thus comparable to proteinase K for use in biochemical experiments. The principal advantage of Nagarse is that it is inexpensive, unlike proteinase K, and our findings indicated that Nagarse is very useful as a substitute for proteinase K for the DNA study. Copyright 2000 Wiley-Liss, Inc.

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Year:  2000        PMID: 10797607      PMCID: PMC6808102     

Source DB:  PubMed          Journal:  J Clin Lab Anal        ISSN: 0887-8013            Impact factor:   2.352


  10 in total

1.  Analysis of Legionella pneumophila serogroup 1 isolates by pulsed-field gel electrophoresis.

Authors:  T J Marrie; S Tyler; G Bezanson; C Dendy; W Johnson
Journal:  J Clin Microbiol       Date:  1999-01       Impact factor: 5.948

2.  DNA extraction from human urinary sediment.

Authors:  M Yokota; N Tatsumi; I Tsuda; T Takubo; M Hiyoshi
Journal:  J Clin Lab Anal       Date:  1998       Impact factor: 2.352

3.  Rapid preparation of bacterial DNA for pulsed-field gel electrophoresis.

Authors:  M G Matushek; M J Bonten; M K Hayden
Journal:  J Clin Microbiol       Date:  1996-10       Impact factor: 5.948

4.  A simple and rapid method for HLA-DQA1 genotyping by digestion of PCR-amplified DNA with allele specific restriction endonucleases.

Authors:  M Maeda; N Murayama; H Ishii; N Uryu; M Ota; K Tsuji; H Inoko
Journal:  Tissue Antigens       Date:  1989-11

5.  Molecular typing of enterohemorrhagic Escherichia coli O157:H7 isolates in Japan by using pulsed-field gel electrophoresis.

Authors:  H Izumiya; J Terajima; A Wada; Y Inagaki; K I Itoh; K Tamura; H Watanabe
Journal:  J Clin Microbiol       Date:  1997-07       Impact factor: 5.948

6.  The complete amino acid sequence of two types of subtilisin, BPN' and Carlsberg.

Authors:  E L Smith; F S Markland; C B Kasper; R J DeLange; M Landon; W H Evans
Journal:  J Biol Chem       Date:  1966-12-25       Impact factor: 5.157

Review 7.  Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing.

Authors:  F C Tenover; R D Arbeit; R V Goering; P A Mickelsen; B E Murray; D H Persing; B Swaminathan
Journal:  J Clin Microbiol       Date:  1995-09       Impact factor: 5.948

8.  Biased sinusoidal field gel electrophoresis for the separation of large DNA.

Authors:  T Kotaka; S Adachi; T Shikata
Journal:  Electrophoresis       Date:  1993-04       Impact factor: 3.535

9.  Typing of human Campylobacter jejuni isolates in Finland by pulsed-field gel electrophoresis.

Authors:  M L Hänninen; S Pajarre; M L Klossner; H Rautelin
Journal:  J Clin Microbiol       Date:  1998-06       Impact factor: 5.948

10.  DNA fingerprinting of Escherichia coli O157:H7 strains by pulsed-field gel electrophoresis.

Authors:  H Böhm; H Karch
Journal:  J Clin Microbiol       Date:  1992-08       Impact factor: 5.948

  10 in total

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