Literature DB >> 10785381

Biophysical studies of the development of amyloid fibrils from a peptide fragment of cold shock protein B.

D K Wilkins1, C M Dobson, M Gross.   

Abstract

The peptide CspB-1, which represents residues 1-22 of the cold shock protein CspB from Bacillus subtilis, has been shown to form amyloid fibrils when solutions containing this peptide in aqueous (50%) acetonitrile are diluted in water [M. Gross et al. (1999) Protein Science 8, 1350-1357] We established conditions in which reproducible kinetic steps associated with the formation of these fibrils can be observed. Studies combining these conditions with a range of biophysical methods reveal that a variety of distinct events occurs during the process that results in amyloid fibrils. A CD spectrum indicative of beta structure is observed within 1 min of the solvent shift, and its intensity increases on a longer timescale in at least two kinetic phases. The characteristic wavelength shift of the amyloid-binding dye Congo Red is established within 30 min of the initiation of the aggregation process and corresponds to one of the phases observed by CD and to changes in the Fourier transform-infrared spectrum indicative of beta structure. Short fibrillar structures begin to be visible under the electron microscope after these events, and longer, well-defined amyloid fibrils are established on a timescale of hours. NMR spectroscopy shows that there are no significant changes in the concentration of monomeric species in solution during the events leading to fibril formation, but that soluble aggregates too large to be visible in NMR spectra are present throughout the process. A model for amyloid formation by this peptide is presented which is consistent with these kinetic data and with published work on a variety of disease-related systems. These findings support the concept that the ability to form amyloid fibrils is a generic property of polypeptide chains, and that the mechanism of their formation is similar for different peptides and proteins.

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Year:  2000        PMID: 10785381     DOI: 10.1046/j.1432-1327.2000.01270.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  11 in total

1.  Conformational characterization of oligomeric intermediates and aggregates in beta-lactoglobulin heat aggregation.

Authors:  R Carrotta; R Bauer; R Waninge; C Rischel
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

2.  Amyloid-forming peptides selected proteolytically from phage display library.

Authors:  Katarzyna Koscielska-Kasprzak; Jacek Otlewski
Journal:  Protein Sci       Date:  2003-08       Impact factor: 6.725

3.  A general model for amyloid fibril assembly based on morphological studies using atomic force microscopy.

Authors:  Ritu Khurana; Cristian Ionescu-Zanetti; Maighdlin Pope; Jie Li; Liza Nielson; Marina Ramírez-Alvarado; Lynn Regan; Anthony L Fink; Sue A Carter
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

4.  Role of protein stabilizers on the conformation of the unfolded state of cytochrome c and its early folding kinetics: investigation at single molecular resolution.

Authors:  Shubhasis Haldar; Samaresh Mitra; Krishnananda Chattopadhyay
Journal:  J Biol Chem       Date:  2010-06-10       Impact factor: 5.157

5.  Molecular dynamics simulations of spontaneous fibril formation by random-coil peptides.

Authors:  Hung D Nguyen; Carol K Hall
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-08       Impact factor: 11.205

6.  FTIR reveals structural differences between native beta-sheet proteins and amyloid fibrils.

Authors:  Giorgia Zandomeneghi; Mark R H Krebs; Margaret G McCammon; Marcus Fändrich
Journal:  Protein Sci       Date:  2004-11-10       Impact factor: 6.725

7.  Amyloidogenic sequences in native protein structures.

Authors:  Susan Tzotzos; Andrew J Doig
Journal:  Protein Sci       Date:  2010-02       Impact factor: 6.725

8.  Structural transitions and interactions in the early stages of human glucagon amyloid fibrillation.

Authors:  Balakrishnan S Moorthy; Hamed Tabatabaei Ghomi; Markus A Lill; Elizabeth M Topp
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

9.  Monitoring Alzheimer Amyloid Peptide Aggregation by EPR.

Authors:  I Sepkhanova; M Drescher; N J Meeuwenoord; R W A L Limpens; R I Koning; D V Filippov; M Huber
Journal:  Appl Magn Reson       Date:  2009-10-31       Impact factor: 0.831

10.  Different conformation of thiol protease inhibitor during amyloid formation: inhibition by curcumin and quercetin.

Authors:  Mohd Shahnawaz Khan; Abdulrahman M Al-Senaidy; Medha Priyadarshini; Aaliya Shah; Bilqees Bano
Journal:  J Fluoresc       Date:  2013-01-22       Impact factor: 2.217

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