Literature DB >> 10783286

Three-dimensional solid-state NMR spectroscopy is essential for resolution of resonances from in-plane residues in uniformly (15)N-labeled helical membrane proteins in oriented lipid bilayers.

F M Marassi1, C Ma, J J Gesell, S J Opella.   

Abstract

Uniformly (15)N-labeled samples of membrane proteins with helices aligned parallel to the membrane surface give two-dimensional PISEMA spectra that are highly overlapped due to limited dispersions of (1)H-(15)N dipolar coupling and (15)N chemical shift frequencies. However, resolution is greatly improved in three-dimensional (1)H chemical shift/(1)H-(15)N dipolar coupling/(15)N chemical shift correlation spectra. The 23-residue antibiotic peptide magainin and a 54-residue polypeptide corresponding to the cytoplasmic domain of the HIV-1 accessory protein Vpu are used as examples. Both polypeptides consist almost entirely of alpha-helices, with their axes aligned parallel to the membrane surface. The measurement of three orientationally dependent frequencies for Val17 of magainin enabled the three-dimensional orientation of this helical peptide to be determined in the lipid bilayer. Copyright 2000 Academic Press.

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Year:  2000        PMID: 10783286     DOI: 10.1006/jmre.2000.2036

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  25 in total

1.  A solid-state NMR index of helical membrane protein structure and topology.

Authors:  F M Marassi; S J Opella
Journal:  J Magn Reson       Date:  2000-05       Impact factor: 2.229

Review 2.  Nuclear magnetic resonance of membrane-associated peptides and proteins.

Authors:  S J Opella; C Ma; F M Marassi
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

3.  Molecular dynamics simulations on the first two helices of Vpu from HIV-1.

Authors:  I Sramala; V Lemaitre; J D Faraldo-Gómez; S Vincent; A Watts; W B Fischer
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

4.  Using pisa pies to resolve ambiguities in angular constraints from PISEMA spectra of aligned proteins.

Authors:  Francesca M Marassi; Stanley J Opella
Journal:  J Biomol NMR       Date:  2002-07       Impact factor: 2.835

5.  Conformation of membrane-associated proapoptotic tBid.

Authors:  Xiao-Min Gong; Jungyuen Choi; Carla M Franzin; Dayong Zhai; John C Reed; Francesca M Marassi
Journal:  J Biol Chem       Date:  2004-04-28       Impact factor: 5.157

Review 6.  Structure determination of membrane proteins by NMR spectroscopy.

Authors:  Stanley J Opella; Francesca M Marassi
Journal:  Chem Rev       Date:  2004-08       Impact factor: 60.622

Review 7.  Comparative NMR studies demonstrate profound differences between two viroporins: p7 of HCV and Vpu of HIV-1.

Authors:  Gabriel A Cook; Hua Zhang; Sang Ho Park; Yan Wang; Stanley J Opella
Journal:  Biochim Biophys Acta       Date:  2010-08-18

Review 8.  Dynamic membrane interactions of antibacterial and antifungal biomolecules, and amyloid peptides, revealed by solid-state NMR spectroscopy.

Authors:  Akira Naito; Nobuaki Matsumori; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-06-06       Impact factor: 3.770

9.  A simple approach to membrane protein secondary structure and topology based on NMR spectroscopy.

Authors:  F M Marassi
Journal:  Biophys J       Date:  2001-02       Impact factor: 4.033

10.  Molecular dynamics simulation of transmembrane polypeptide orientational fluctuations.

Authors:  David J Goodyear; Simon Sharpe; Chris W M Grant; Michael R Morrow
Journal:  Biophys J       Date:  2004-10-15       Impact factor: 4.033

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