Literature DB >> 10762271

The yvaJ gene of Bacillus subtilis encodes a 3'-to-5' exoribonuclease and is not essential in a strain lacking polynucleotide phosphorylase.

I A Oussenko1, D H Bechhofer.   

Abstract

Studies of Bacillus subtilis RNases that are involved in mRNA degradation reveal a different pattern from that of Escherichia coli. A strain lacking polynucleotide phosphorylase, the major 3'-to-5' exoribonuclease activity in cell extracts, is viable. Here, we show that the B. subtilis yvaJ gene encodes a second 3'-to-5' exoribonuclease. A strain lacking both of these RNases grows slowly but is viable. The existence of another, as yet unknown, 3'-to-5' exoribonuclease in B. subtilis is suggested.

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Year:  2000        PMID: 10762271      PMCID: PMC111333          DOI: 10.1128/JB.182.9.2639-2642.2000

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  10 in total

1.  Protection against 3'-to-5' RNA decay in Bacillus subtilis.

Authors:  G A Farr; I A Oussenko; D H Bechhofer
Journal:  J Bacteriol       Date:  1999-12       Impact factor: 3.490

2.  Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12.

Authors:  W P Donovan; S R Kushner
Journal:  Proc Natl Acad Sci U S A       Date:  1986-01       Impact factor: 11.205

3.  Decay of ermC mRNA in a polynucleotide phosphorylase mutant of Bacillus subtilis.

Authors:  D H Bechhofer; W Wang
Journal:  J Bacteriol       Date:  1998-11       Impact factor: 3.490

4.  The vacB gene required for virulence in Shigella flexneri and Escherichia coli encodes the exoribonuclease RNase R.

Authors:  Z F Cheng; Y Zuo; Z Li; K E Rudd; M P Deutscher
Journal:  J Biol Chem       Date:  1998-06-05       Impact factor: 5.157

5.  Exoribonucleases in wild type Escherichia coli and RNase II-deficient mutants.

Authors:  T Kasai; R S Gupta; D Schlessinger
Journal:  J Biol Chem       Date:  1977-12-25       Impact factor: 5.157

6.  Ribonuclease T: new exoribonuclease possibly involved in end-turnover of tRNA.

Authors:  M P Deutscher; C W Marlor; R Zaniewski
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

7.  Enzymatic basis for hydrolytic versus phosphorolytic mRNA degradation in Escherichia coli and Bacillus subtilis.

Authors:  M P Deutscher; N B Reuven
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-15       Impact factor: 11.205

8.  Polynucleotide phosphorylase is necessary for competence development in Bacillus subtilis.

Authors:  A Luttinger; J Hahn; D Dubnau
Journal:  Mol Microbiol       Date:  1996-01       Impact factor: 3.501

9.  In vitro processing activity of Bacillus subtilis polynucleotide phosphorylase.

Authors:  S Mitra; K Hue; D H Bechhofer
Journal:  Mol Microbiol       Date:  1996-01       Impact factor: 3.501

10.  Properties of a Bacillus subtilis polynucleotide phosphorylase deletion strain.

Authors:  W Wang; D H Bechhofer
Journal:  J Bacteriol       Date:  1996-04       Impact factor: 3.490

  10 in total
  14 in total

Review 1.  Exoribonuclease superfamilies: structural analysis and phylogenetic distribution.

Authors:  Y Zuo; M P Deutscher
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

2.  Global transcriptional response of Bacillus subtilis to heat shock.

Authors:  J D Helmann; M F Wu; P A Kobel; F J Gamo; M Wilson; M M Morshedi; M Navre; C Paddon
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

3.  Participation of 3'-to-5' exoribonucleases in the turnover of Bacillus subtilis mRNA.

Authors:  Irina A Oussenko; Teppei Abe; Hiromi Ujiie; Akira Muto; David H Bechhofer
Journal:  J Bacteriol       Date:  2005-04       Impact factor: 3.490

4.  Global analysis of mRNA decay intermediates in Bacillus subtilis wild-type and polynucleotide phosphorylase-deletion strains.

Authors:  Bo Liu; Gintaras Deikus; Anna Bree; Sylvain Durand; Daniel B Kearns; David H Bechhofer
Journal:  Mol Microbiol       Date:  2014-08-21       Impact factor: 3.501

5.  Recycling of a regulatory protein by degradation of the RNA to which it binds.

Authors:  Gintaras Deikus; Paul Babitzke; David H Bechhofer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-19       Impact factor: 11.205

6.  Bacillus subtilis YhaM, a member of a new family of 3'-to-5' exonucleases in gram-positive bacteria.

Authors:  Irina A Oussenko; Roberto Sanchez; David H Bechhofer
Journal:  J Bacteriol       Date:  2002-11       Impact factor: 3.490

Review 7.  RNA processing and degradation in Bacillus subtilis.

Authors:  Ciarán Condon
Journal:  Microbiol Mol Biol Rev       Date:  2003-06       Impact factor: 11.056

8.  Bacillus subtilis YhcR, a high-molecular-weight, nonspecific endonuclease with a unique domain structure.

Authors:  Irina A Oussenko; Roberto Sanchez; David H Bechhofer
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

Review 9.  Bacterial ribonucleases and their roles in RNA metabolism.

Authors:  David H Bechhofer; Murray P Deutscher
Journal:  Crit Rev Biochem Mol Biol       Date:  2019-06       Impact factor: 8.250

Review 10.  Composition and conservation of the mRNA-degrading machinery in bacteria.

Authors:  Vladimir R Kaberdin; Dharam Singh; Sue Lin-Chao
Journal:  J Biomed Sci       Date:  2011-03-22       Impact factor: 8.410

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