Literature DB >> 10760256

Crystal structure of the cystine C-S lyase from Synechocystis: stabilization of cysteine persulfide for FeS cluster biosynthesis.

T Clausen1, J T Kaiser, C Steegborn, R Huber, D Kessler.   

Abstract

FeS clusters are versatile cofactors of a variety of proteins, but the mechanisms of their biosynthesis are still unknown. The cystine C-S lyase from Synechocystis has been identified as a participant in ferredoxin FeS cluster formation. Herein, we report on the crystal structure of the lyase and of a complex with the reaction products of cystine cleavage at 1.8- and 1.55-A resolution, respectively. The sulfur-containing product was unequivocally identified as cysteine persulfide. The reactive persulfide group is fixed by a hydrogen bond to His-114 in the center of a hydrophobic pocket and is thereby shielded from the solvent. Binding and stabilization of the cysteine persulfide represent an alternative to the generation of a protein-bound persulfide by NifS-like proteins and point to the general importance of persulfidic compounds for FeS cluster assembly.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10760256      PMCID: PMC18106          DOI: 10.1073/pnas.97.8.3856

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Cysteine sulfinate desulfinase, a NIFS-like protein of Escherichia coli with selenocysteine lyase and cysteine desulfurase activities. Gene cloning, purification, and characterization of a novel pyridoxal enzyme.

Authors:  H Mihara; T Kurihara; T Yoshimura; K Soda; N Esaki
Journal:  J Biol Chem       Date:  1997-09-05       Impact factor: 5.157

2.  Methods used in the structure determination of bovine mitochondrial F1 ATPase.

Authors:  J P Abrahams; A G Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1996-01-01

3.  cDNA cloning and characterization of mouse nifS-like protein, m-Nfs1: mitochondrial localization of eukaryotic NifS-like proteins.

Authors:  Y Nakai; Y Yoshihara; H Hayashi; H Kagamiyama
Journal:  FEBS Lett       Date:  1998-08-14       Impact factor: 4.124

Review 4.  Iron-sulfur proteins: new roles for old clusters.

Authors:  M K Johnson
Journal:  Curr Opin Chem Biol       Date:  1998-04       Impact factor: 8.822

5.  Homology of pyridoxal-5'-phosphate-dependent aminotransferases with the cobC (cobalamin synthesis), nifS (nitrogen fixation), pabC (p-aminobenzoate synthesis) and malY (abolishing endogenous induction of the maltose system) gene products.

Authors:  P K Mehta; P Christen
Journal:  Eur J Biochem       Date:  1993-01-15

6.  Homology of the NifS family of proteins to a new class of pyridoxal phosphate-dependent enzymes.

Authors:  C Ouzounis; C Sander
Journal:  FEBS Lett       Date:  1993-05-10       Impact factor: 4.124

Review 7.  Iron-sulfur clusters: nature's modular, multipurpose structures.

Authors:  H Beinert; R H Holm; E Münck
Journal:  Science       Date:  1997-08-01       Impact factor: 47.728

8.  The mitochondrial proteins Atm1p and Nfs1p are essential for biogenesis of cytosolic Fe/S proteins.

Authors:  G Kispal; P Csere; C Prohl; R Lill
Journal:  EMBO J       Date:  1999-07-15       Impact factor: 11.598

9.  Mechanism for the desulfurization of L-cysteine catalyzed by the nifS gene product.

Authors:  L Zheng; R H White; V L Cash; D R Dean
Journal:  Biochemistry       Date:  1994-04-19       Impact factor: 3.162

10.  Suppressors of superoxide dismutase (SOD1) deficiency in Saccharomyces cerevisiae. Identification of proteins predicted to mediate iron-sulfur cluster assembly.

Authors:  J Strain; C R Lorenz; J Bode; S Garland; G A Smolen; D T Ta; L E Vickery; V C Culotta
Journal:  J Biol Chem       Date:  1998-11-20       Impact factor: 5.157

View more
  14 in total

1.  Crystal structure of Escherichia coli diaminopropionate ammonia-lyase reveals mechanism of enzyme activation and catalysis.

Authors:  Shveta Bisht; Venkatesan Rajaram; Sakshibeedu R Bharath; Josyula Nitya Kalyani; Farida Khan; Appaji N Rao; Handanahal S Savithri; Mathur R N Murthy
Journal:  J Biol Chem       Date:  2012-04-13       Impact factor: 5.157

2.  Evolutionarily conserved regions and hydrophobic contacts at the superfamily level: The case of the fold-type I, pyridoxal-5'-phosphate-dependent enzymes.

Authors:  Alessandro Paiardini; Francesco Bossa; Stefano Pascarella
Journal:  Protein Sci       Date:  2004-11       Impact factor: 6.725

3.  Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi.

Authors:  Nobutaka Numoto; Taro Nakagawa; Akiko Kita; Yuichi Sasayama; Yoshihiro Fukumori; Kunio Miki
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-03       Impact factor: 11.205

Review 4.  Iron-sulfur cluster biosynthesis in photosynthetic organisms.

Authors:  Dorothea Kessler; Jutta Papenbrock
Journal:  Photosynth Res       Date:  2005-11-12       Impact factor: 3.573

5.  Snapshots of C-S Cleavage in Egt2 Reveals Substrate Specificity and Reaction Mechanism.

Authors:  Seema Irani; Nathchar Naowarojna; Yang Tang; Karan R Kathuria; Shu Wang; Anxhela Dhembi; Norman Lee; Wupeng Yan; Huijue Lyu; Catherine E Costello; Pinghua Liu; Yan Jessie Zhang
Journal:  Cell Chem Biol       Date:  2018-03-01       Impact factor: 8.116

6.  Structural basis for substrate activation and regulation by cystathionine beta-synthase (CBS) domains in cystathionine {beta}-synthase.

Authors:  Markos Koutmos; Omer Kabil; Janet L Smith; Ruma Banerjee
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-16       Impact factor: 11.205

7.  Components involved in assembly and dislocation of iron-sulfur clusters on the scaffold protein Isu1p.

Authors:  Ulrich Mühlenhoff; Jana Gerber; Nadine Richhardt; Roland Lill
Journal:  EMBO J       Date:  2003-09-15       Impact factor: 11.598

Review 8.  Chemical Biology of H2S Signaling through Persulfidation.

Authors:  Milos R Filipovic; Jasmina Zivanovic; Beatriz Alvarez; Ruma Banerjee
Journal:  Chem Rev       Date:  2017-11-07       Impact factor: 60.622

9.  Structural changes during cysteine desulfurase CsdA and sulfur acceptor CsdE interactions provide insight into the trans-persulfuration.

Authors:  Sunmin Kim; SangYoun Park
Journal:  J Biol Chem       Date:  2013-08-02       Impact factor: 5.157

10.  Reactions of isolated persulfides provide insights into the interplay between H2S and persulfide reactivity.

Authors:  T Spencer Bailey; Michael D Pluth
Journal:  Free Radic Biol Med       Date:  2015-10-08       Impact factor: 7.376

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.