Literature DB >> 10753109

Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain.

S C Agalarov1, G Sridhar Prasad, P M Funke, C D Stout, J R Williamson.   

Abstract

The crystal structure of a 70-kilodalton ribonucleoprotein complex from the central domain of the Thermus thermophilus 30S ribosomal subunit was solved at 2.6 angstrom resolution. The complex consists of a 104-nucleotide RNA fragment composed of two three-helix junctions that lie at the end of a central helix, and the ribosomal proteins S15, S6, and S18. S15 binds the ribosomal RNA early in the assembly of the 30S ribosomal subunit, stabilizing a conformational reorganization of the two three-helix junctions that creates the RNA fold necessary for subsequent binding of S6 and S18. The structure of the complex demonstrates the central role of S15-induced reorganization of central domain RNA for the subsequent steps of ribosome assembly.

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Year:  2000        PMID: 10753109     DOI: 10.1126/science.288.5463.107

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  64 in total

1.  Straightening of bulged RNA by the double-stranded RNA-binding domain from the protein kinase PKR.

Authors:  X Zheng; P C Bevilacqua
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

2.  Crystal structure of mammalian poly(A) polymerase in complex with an analog of ATP.

Authors:  G Martin; W Keller; S Doublié
Journal:  EMBO J       Date:  2000-08-15       Impact factor: 11.598

3.  Assembly of the human signal recognition particle (SRP): overlap of regions required for binding of protein SRP54 and assembly control.

Authors:  J Yin; C H Yang; C Zwieb
Journal:  RNA       Date:  2001-10       Impact factor: 4.942

4.  Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules.

Authors:  Harold D Kim; G Ulrich Nienhaus; Taekjip Ha; Jeffrey W Orr; James R Williamson; Steven Chu
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

5.  Solution structure of the LicT-RNA antitermination complex: CAT clamping RAT.

Authors:  Yinshan Yang; Nathalie Declerck; Xavier Manival; Stéphane Aymerich; Michel Kochoyan
Journal:  EMBO J       Date:  2002-04-15       Impact factor: 11.598

6.  Hierarchical, clustered protein interactions with U4/U6 snRNA: a biochemical role for U4/U6 proteins.

Authors:  Stephanie Nottrott; Henning Urlaub; Reinhard Lührmann
Journal:  EMBO J       Date:  2002-10-15       Impact factor: 11.598

Review 7.  After the ribosome structures: how are the subunits assembled?

Authors:  James R Williamson
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

8.  Molecular dynamics reveals the stabilizing role of loop closing residues in kissing interactions: comparison between TAR-TAR* and TAR-aptamer.

Authors:  François Beaurain; Carmelo Di Primo; Jean Jacques Toulmé; Michel Laguerre
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

9.  Simulation, experiment, and evolution: understanding nucleation in protein S6 folding.

Authors:  Isaac A Hubner; Mikael Oliveberg; Eugene I Shakhnovich
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-18       Impact factor: 11.205

10.  Long-residency hydration, cation binding, and dynamics of loop E/helix IV rRNA-L25 protein complex.

Authors:  Kamila Réblová; Nad'a Spacková; Jaroslav Koca; Neocles B Leontis; Jirí Sponer
Journal:  Biophys J       Date:  2004-08-31       Impact factor: 4.033

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