Literature DB >> 10747074

Predicting rates of inbreeding in populations undergoing selection.

J A Woolliams1, P Bijma.   

Abstract

Tractable forms of predicting rates of inbreeding (DeltaF) in selected populations with general indices, nonrandom mating, and overlapping generations were developed, with the principal results assuming a period of equilibrium in the selection process. An existing theorem concerning the relationship between squared long-term genetic contributions and rates of inbreeding was extended to nonrandom mating and to overlapping generations. DeltaF was shown to be approximately (1)/(4)(1 - omega) times the expected sum of squared lifetime contributions, where omega is the deviation from Hardy-Weinberg proportions. This relationship cannot be used for prediction since it is based upon observed quantities. Therefore, the relationship was further developed to express DeltaF in terms of expected long-term contributions that are conditional on a set of selective advantages that relate the selection processes in two consecutive generations and are predictable quantities. With random mating, if selected family sizes are assumed to be independent Poisson variables then the expected long-term contribution could be substituted for the observed, providing (1)/(4) (since omega = 0) was increased to (1)/(2). Established theory was used to provide a correction term to account for deviations from the Poisson assumptions. The equations were successfully applied, using simple linear models, to the problem of predicting DeltaF with sib indices in discrete generations since previously published solutions had proved complex.

Mesh:

Year:  2000        PMID: 10747074      PMCID: PMC1461013     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  9 in total

1.  Expected genetic contributions and their impact on gene flow and genetic gain.

Authors:  J A Woolliams; P Bijma; B Villanueva
Journal:  Genetics       Date:  1999-10       Impact factor: 4.562

2.  A general procedure for predicting rates of inbreeding in populations undergoing mass selection.

Authors:  P Bijma; J A Van Arendonk; J A Woolliams
Journal:  Genetics       Date:  2000-04       Impact factor: 4.562

3.  Prediction of genetic contributions and generation intervals in populations with overlapping generations under selection.

Authors:  P Bijma; J A Woolliams
Journal:  Genetics       Date:  1999-03       Impact factor: 4.562

4.  Effective size of nonrandom mating populations.

Authors:  A Caballero; W G Hill
Journal:  Genetics       Date:  1992-04       Impact factor: 4.562

5.  A note on effective population size with overlapping generations.

Authors:  W G Hill
Journal:  Genetics       Date:  1979-05       Impact factor: 4.562

6.  Prediction of rates of inbreeding in selected populations.

Authors:  N R Wray; R Thompson
Journal:  Genet Res       Date:  1990-02       Impact factor: 1.588

7.  Multifactorial qualitative traits: genetic analysis and prediction of recurrence risks.

Authors:  N R Mendell; R C Elston
Journal:  Biometrics       Date:  1974-03       Impact factor: 2.571

8.  Effective size of populations with overlapping generations.

Authors:  W G Hill
Journal:  Theor Popul Biol       Date:  1972-09       Impact factor: 1.570

9.  Effective size of populations under selection.

Authors:  E Santiago; A Caballero
Journal:  Genetics       Date:  1995-02       Impact factor: 4.562

  9 in total
  14 in total

1.  A general procedure for predicting rates of inbreeding in populations undergoing mass selection.

Authors:  P Bijma; J A Van Arendonk; J A Woolliams
Journal:  Genetics       Date:  2000-04       Impact factor: 4.562

2.  Prediction of rates of inbreeding in populations selected on best linear unbiased prediction of breeding value

Authors: 
Journal:  Genetics       Date:  2000-09       Impact factor: 4.562

3.  Prediction of rates of inbreeding in populations selected on best linear unbiased prediction of breeding value.

Authors:  P Bijma; J A Woolliams
Journal:  Genetics       Date:  2000-09       Impact factor: 4.562

4.  Fixed contributions designs vs. minimization of global coancestry to control inbreeding in small populations.

Authors:  J Fernández; M A Toro; A Caballero
Journal:  Genetics       Date:  2003-10       Impact factor: 4.562

5.  Minimizing inbreeding by managing genetic contributions across generations.

Authors:  Leopoldo Sánchez; Piter Bijma; John A Woolliams
Journal:  Genetics       Date:  2003-08       Impact factor: 4.562

6.  Impact of nonrandom mating on genetic variance and gene flow in populations with mass selection.

Authors:  Leopoldo Sánchez; John A Woolliams
Journal:  Genetics       Date:  2004-01       Impact factor: 4.562

Review 7.  Prediction and estimation of effective population size.

Authors:  J Wang; E Santiago; A Caballero
Journal:  Heredity (Edinb)       Date:  2016-06-29       Impact factor: 3.821

8.  Effect of non-random mating on genomic and BLUP selection schemes.

Authors:  Kahsay G Nirea; Anna K Sonesson; John A Woolliams; Theo H E Meuwissen
Journal:  Genet Sel Evol       Date:  2012-04-11       Impact factor: 4.297

9.  Selection dramatically reduces effective population size in HIV-1 infection.

Authors:  Yi Liu; John E Mittler
Journal:  BMC Evol Biol       Date:  2008-05-03       Impact factor: 3.260

10.  Indirect genetic effects and inbreeding: consequences of BLUP selection for socially affected traits on rate of inbreeding.

Authors:  Hooi Ling Khaw; Raul W Ponzoni; Piter Bijma
Journal:  Genet Sel Evol       Date:  2014-06-24       Impact factor: 4.297

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