Literature DB >> 10745104

Coding efficiency and information rates in transmembrane signaling.

K Prank1, F Gabbiani, G Brabant.   

Abstract

A variety of cell types responds to hormonal stimuli by repetitive spikes in the intracellular concentration of calcium ([Ca(2+)](i)) which have been demonstrated to encode information in their frequency, amplitude, and duration. These [Ca(2+)](i)-spike trains are able to specifically regulate distinct cellular functions. Using a mathematical model for receptor-controlled [Ca(2+)](i) oscillations in hepatocytes we investigate the encoding of fluctuating hormonal signals in [Ca(2+)](i)-spike trains. The transmembrane information transfer is quantified by using an information-theoretic reverse-engineering approach which allows to reconstruct the dynamic hormonal stimulus from the [Ca(2+)](i)-spike trains. This approach allows to estimate the accuracy of coding as well as the rate of transmembrane information transfer. We found that up to 87% of the dynamic stimulus information can be encoded in the [Ca(2+)](i)-spike train at a maximum information transfer rate of 1.1 bit per [Ca(2+)](i)-spike. These numerical results for humoral information transfer are in the same order as in a number of sensory neuronal systems despite several orders of magnitude different time scales of operation suggesting a universal principle of information processing in both biological systems.

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Year:  2000        PMID: 10745104     DOI: 10.1016/s0303-2647(99)00078-7

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  7 in total

1.  A G-protein subunit translocation embedded network motif underlies GPCR regulation of calcium oscillations.

Authors:  Lopamudra Giri; Anilkumar K Patel; W K Ajith Karunarathne; Vani Kalyanaraman; K V Venkatesh; N Gautam
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

2.  ATP-mediated cell-cell signaling in the organ of Corti: the role of connexin channels.

Authors:  Paromita Majumder; Giulia Crispino; Laura Rodriguez; Catalin Dacian Ciubotaru; Fabio Anselmi; Valeria Piazza; Mario Bortolozzi; Fabio Mammano
Journal:  Purinergic Signal       Date:  2010-06-17       Impact factor: 3.765

3.  Calcium signaling in the cochlea - Molecular mechanisms and physiopathological implications.

Authors:  Federico Ceriani; Fabio Mammano
Journal:  Cell Commun Signal       Date:  2012-07-12       Impact factor: 5.712

4.  A Markovian Entropy Measure for the Analysis of Calcium Activity Time Series.

Authors:  John P Marken; Andrew D Halleran; Atiqur Rahman; Laura Odorizzi; Michael C LeFew; Caroline A Golino; Peter Kemper; Margaret S Saha
Journal:  PLoS One       Date:  2016-12-15       Impact factor: 3.240

5.  Dynamic properties of calcium-activated chloride currents in Xenopus laevis oocytes.

Authors:  Ildefonso M De la Fuente; Iker Malaina; Alberto Pérez-Samartín; María Dolores Boyano; Gorka Pérez-Yarza; Carlos Bringas; Álvaro Villarroel; María Fedetz; Rogelio Arellano; Jesus M Cortes; Luis Martínez
Journal:  Sci Rep       Date:  2017-02-13       Impact factor: 4.379

6.  Assessment of a Silicon-Photomultiplier-Based Platform for the Measurement of Intracellular Calcium Dynamics with Targeted Aequorin.

Authors:  Federico Alessandro Ruffinatti; Samuela Lomazzi; Luca Nardo; Romualdo Santoro; Alexander Martemiyanov; Marianna Dionisi; Laura Tapella; Armando A Genazzani; Dmitry Lim; Carla Distasi; Massimo Caccia
Journal:  ACS Sens       Date:  2020-08-05       Impact factor: 7.711

7.  Reduced phosphatidylinositol 4,5-bisphosphate synthesis impairs inner ear Ca2+ signaling and high-frequency hearing acquisition.

Authors:  Laura Rodriguez; Elena Simeonato; Pietro Scimemi; Fabio Anselmi; Bianca Calì; Giulia Crispino; Catalin D Ciubotaru; Mario Bortolozzi; Fabian Galindo Ramirez; Paromita Majumder; Edoardo Arslan; Pietro De Camilli; Tullio Pozzan; Fabio Mammano
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-13       Impact factor: 11.205

  7 in total

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