Literature DB >> 10739916

Applications of single-wavelength anomalous dispersion at high and atomic resolution.

D E Brodersen1, E de La Fortelle, C Vonrhein, G Bricogne, J Nyborg, M Kjeldgaard.   

Abstract

Two examples of the application of single-wavelength anomalous dispersion (SAD) in macromolecular structure determination are described, both using the statistical phasing program SHARP. For the holmium-substituted calcium-binding protein psoriasin (22.7 kDa), a set of accurate phases has been obtained to a resolution of 1.05 A without recourse to an atomic model of the molecule. The accuracy of the phases resulted in an electron-density map of a quality comparable to sigma(A)-weighted 2mF(o) - DF(c) maps derived from the final model refined with SHELX97. Comparison of the refined and SAD electron-density maps showed significant discrepancies resulting from the iterative refinement in reciprocal space. Additionally, it is shown that the structure of psoriasin can be determined from native data extending to 2.0 A alone by exploiting the minute anomalous signal from a bound zinc ion.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10739916     DOI: 10.1107/s0907444900000834

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  19 in total

1.  Structural basis for the substrate specificity of a novel β-N-acetylhexosaminidase StrH protein from Streptococcus pneumoniae R6.

Authors:  Yong-Liang Jiang; Wei-Li Yu; Jun-Wei Zhang; Cecile Frolet; Anne-Marie Di Guilmi; Cong-Zhao Zhou; Thierry Vernet; Yuxing Chen
Journal:  J Biol Chem       Date:  2011-10-19       Impact factor: 5.157

2.  Structural Analysis of the Catalytic Mechanism and Substrate Specificity of Anabaena Alkaline Invertase InvA Reveals a Novel Glucosidase.

Authors:  Jin Xie; Kun Cai; Hai-Xi Hu; Yong-Liang Jiang; Feng Yang; Peng-Fei Hu; Dong-Dong Cao; Wei-Fang Li; Yuxing Chen; Cong-Zhao Zhou
Journal:  J Biol Chem       Date:  2016-10-24       Impact factor: 5.157

3.  Structure of a novel O-linked N-acetyl-D-glucosamine (O-GlcNAc) transferase, GtfA, reveals insights into the glycosylation of pneumococcal serine-rich repeat adhesins.

Authors:  Wei-Wei Shi; Yong-Liang Jiang; Fan Zhu; Yi-Hu Yang; Qiu-Yan Shao; Hong-Bo Yang; Yan-Min Ren; Hui Wu; Yuxing Chen; Cong-Zhao Zhou
Journal:  J Biol Chem       Date:  2014-07-25       Impact factor: 5.157

Review 4.  Anomalous diffraction in crystallographic phase evaluation.

Authors:  Wayne A Hendrickson
Journal:  Q Rev Biophys       Date:  2014-02       Impact factor: 5.318

5.  Glycal formation in crystals of uridine phosphorylase.

Authors:  Debamita Paul; Seán E O'Leary; Kanagalaghatta Rajashankar; Weiming Bu; Angela Toms; Ethan C Settembre; Jennie M Sanders; Tadhg P Begley; Steven E Ealick
Journal:  Biochemistry       Date:  2010-04-27       Impact factor: 3.162

6.  Structural and enzymatic characterization of the streptococcal ATP/diadenosine polyphosphate and phosphodiester hydrolase Spr1479/SapH.

Authors:  Yong-Liang Jiang; Jun-Wei Zhang; Wei-Li Yu; Wang Cheng; Chen-Chen Zhang; Cecile Frolet; Anne-Marie Di Guilmi; Thierry Vernet; Cong-Zhao Zhou; Yuxing Chen
Journal:  J Biol Chem       Date:  2011-08-23       Impact factor: 5.157

7.  A cellular endolysosome-modulating pore-forming protein from a toad is negatively regulated by its paralog under oxidizing conditions.

Authors:  Qiquan Wang; Xianling Bian; Lin Zeng; Fei Pan; Lingzhen Liu; Jinyang Liang; Lingyan Wang; Kaifeng Zhou; Wenhui Lee; Yang Xiang; Sheng'an Li; Maikun Teng; Xu Li; Xiaolong Guo; Yun Zhang
Journal:  J Biol Chem       Date:  2020-06-04       Impact factor: 5.157

8.  Defining the enzymatic pathway for polymorphic O-glycosylation of the pneumococcal serine-rich repeat protein PsrP.

Authors:  Yong-Liang Jiang; Hua Jin; Hong-Bo Yang; Rong-Li Zhao; Shiliang Wang; Yuxing Chen; Cong-Zhao Zhou
Journal:  J Biol Chem       Date:  2017-02-28       Impact factor: 5.157

9.  Structural basis for receptor recognition and pore formation of a zebrafish aerolysin-like protein.

Authors:  Ning Jia; Nan Liu; Wang Cheng; Yong-Liang Jiang; Hui Sun; Lan-Lan Chen; Junhui Peng; Yonghui Zhang; Yue-He Ding; Zhi-Hui Zhang; Xuejuan Wang; Gang Cai; Junfeng Wang; Meng-Qiu Dong; Zhiyong Zhang; Hui Wu; Hong-Wei Wang; Yuxing Chen; Cong-Zhao Zhou
Journal:  EMBO Rep       Date:  2015-12-28       Impact factor: 8.807

10.  Atomic resolution experimental phase information reveals extensive disorder and bound 2-methyl-2,4-pentanediol in Ca(2+)-calmodulin.

Authors:  Jiusheng Lin; Henry van den Bedem; Axel T Brunger; Mark A Wilson
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-01-01       Impact factor: 7.652

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.