Literature DB >> 10722151

Synthesis and hybridization properties of DNA-PNA chimeras carrying 5-bromouracil and 5-methylcytosine.

E Ferrer1, A Shevchenko, R Eritja.   

Abstract

The preparation of 5-bromouracil and 5-methylcytosine peptide nucleic acid (PNA) monomers is described. These PNA monomers were used for the preparation of several DNA-PNA chimeras and their hybridization properties are described. The substitution of cytosine by 5-methylcytosine in DNA-PNA chimeras increased duplex stability while substitution of thymine by 5-bromouracil maintained it. Moreover, binding of DNA-PNA chimeras to double-stranded DNA to form triple helices was studied. In contrast to DNA, the presence of 5-methylcytosine and 5-bromouracil in DNA-PNA chimeras destabilized triple helix.

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Year:  2000        PMID: 10722151     DOI: 10.1016/s0968-0896(99)00308-9

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  4 in total

1.  Synthesis and DNA/RNA complementation studies of peptide nucleic acids containing 5-halouracils.

Authors:  Chun-Dong Liu; Jian-Hua Wang; Yang Xie; Hang Chen
Journal:  Medchemcomm       Date:  2016-12-12       Impact factor: 3.597

2.  Acyclic nucleoside phosphonates containing the amide bond.

Authors:  Iwona E Głowacka; Dorota G Piotrowska; Graciela Andrei; Dominique Schols; Robert Snoeck; Andrzej E Wróblewski
Journal:  Monatsh Chem       Date:  2016-10-26       Impact factor: 1.451

3.  Incorporating uracil and 5-halouracils into short peptide nucleic acids for enhanced recognition of A-U pairs in dsRNAs.

Authors:  Kiran M Patil; Desiree-Faye Kaixin Toh; Zhen Yuan; Zhenyu Meng; Zhiyu Shu; Haiping Zhang; Alan Ann Lerk Ong; Manchugondanahalli S Krishna; Lanyuan Lu; Yunpeng Lu; Gang Chen
Journal:  Nucleic Acids Res       Date:  2018-09-06       Impact factor: 16.971

4.  Acyclic nucleoside phosphonates containing the amide bond: hydroxy derivatives.

Authors:  Iwona E Głowacka; Dorota G Piotrowska; Graciela Andrei; Dominique Schols; Robert Snoeck; Andrzej E Wróblewski
Journal:  Monatsh Chem       Date:  2019-03-01       Impact factor: 1.451

  4 in total

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