Literature DB >> 10712611

The NMR solution structure of the ion channel peptaibol chrysospermin C bound to dodecylphosphocholine micelles.

R Anders1, O Ohlenschläger, V Soskic, H Wenschuh, B Heise, L R Brown.   

Abstract

Chrysospermin C is a 19-residue peptaibol capable of forming transmembrane ion channels in phospholipid bilayers. The conformation of chrysospermin C bound to dodecylphosphocholine micelles has been solved using heteronuclear NMR spectroscopy. Selective 15N-labeling and 13C-labeling of specific alpha-aminoisobutyric acid residues was used to obtain complete stereospecific assignments for all eight alpha-aminoisobutyric acid residues. Structures were calculated using 339 distance constraints and 40 angle constraints obtained from NMR data. The NMR structures superimpose with mean global rmsd values to the mean structure of 0. 27 A (backbone heavy atoms) and 0.42 A (all heavy atoms). Chrysospermin C bound to decylphosphocholine micelles displays two well-defined helices at the N-terminus (residues Phe1-Aib9) and C-terminus (Aib13-Trp-ol19). A slight bend preceding Pro14, i.e. encompassing residues 10-12, results in an angle of approximately 38 degrees between the mean axes of the two helical regions. The bend structure observed for chrysospermin C is compatible with the sequences of all 18 long peptaibols and may represent a common 'active' conformation. The structure of chrysospermin C shows clear hydrophobic and hydrophilic surfaces which would be appropriate for the formation of oligomeric ion channels.

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Year:  2000        PMID: 10712611     DOI: 10.1046/j.1432-1327.2000.01177.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  8 in total

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Authors:  Z O Shenkarev; T A Balashova; R G Efremov; Z A Yakimenko; T V Ovchinnikova; J Raap; A S Arseniev
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

2.  Solution NMR studies of antiamoebin, a membrane channel-forming polypeptide.

Authors:  T P Galbraith; R Harris; P C Driscoll; B A Wallace
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

3.  Analysis of peptaibol sequence composition: implications for in vivo synthesis and channel formation.

Authors:  L Whitmore; B A Wallace
Journal:  Eur Biophys J       Date:  2003-10-08       Impact factor: 1.733

4.  Conductance studies on trichotoxin_A50E and implications for channel structure.

Authors:  H Duclohier; G M Alder; C L Bashford; H Brückner; J K Chugh; B A Wallace
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

5.  2D relayed anisotropy correlation NMR: characterization of the 13C' chemical shift tensor orientation in the peptide plane of the dipeptide AibAib.

Authors:  B Heise; J Leppert; H Wenschuh; O Ohlenschläger; M Görlach; R Ramachandran
Journal:  J Biomol NMR       Date:  2001-02       Impact factor: 2.835

6.  Analysis of the amide (15)N chemical shift tensor of the C(alpha) tetrasubstituted constituent of membrane-active peptaibols, the alpha-aminoisobutyric acid residue, compared to those of di- and tri-substituted proteinogenic amino acid residues.

Authors:  Evgeniy Salnikov; Philippe Bertani; Jan Raap; Burkhard Bechinger
Journal:  J Biomol NMR       Date:  2009-10-11       Impact factor: 2.835

7.  Peptaibol zervamicin IIb structure and dynamics refinement from transhydrogen bond J couplings.

Authors:  Z O Shenkarev; T A Balashova; Z A Yakimenko; T V Ovchinnikova; A S Arseniev
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

8.  Molecular modeling of the reductase domain to elucidate the reaction mechanism of reduction of peptidyl thioester into its corresponding alcohol in non-ribosomal peptide synthetases.

Authors:  Balachandran Manavalan; Senthil K Murugapiran; Gwang Lee; Sangdun Choi
Journal:  BMC Struct Biol       Date:  2010-01-12
  8 in total

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