Literature DB >> 10710719

Mechanisms of separation of the complementary strands of DNA during replication.

A I Alexandrov1, N R Cozzarelli, V F Holmes, A B Khodursky, B J Peter, L Postow, V Rybenkov, A V Vologodskii.   

Abstract

This article is a perspective on the separation of the complementary strands of DNA during replication. Given the challenges of DNA strand separation and its vital importance, it is not surprising that cells have developed many strategies for promoting unlinking. We summarize seven different factors that contribute to strand separation and chromosome segregation. These are: (1) supercoiling promotes unlinking by condensation of DNA; (2) unlinking takes place throughout a replicating domain by the complementary action of topoisomerases on precatenanes and supercoils; (3) topological domains isolate the events near the replication fork and permit the supercoiling-dependent condensation of partially replicated DNA; (4) type-II topoisomerases use ATP to actively unlink DNA past the equilibrium position; (5) the effective DNA concentration in vivo is less than the global DNA concentration; (6) mechanical forces help unlink chromosomes; and (7) site-specific recombination promotes unlinking at the termination of replication by resolving circular dimeric chromosomes.

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Year:  1999        PMID: 10710719     DOI: 10.1023/a:1003749416449

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  14 in total

1.  Supercoiling, knotting and replication fork reversal in partially replicated plasmids.

Authors:  L Olavarrieta; M L Martínez-Robles; J M Sogo; A Stasiak; P Hernández; D B Krimer; J B Schvartzman
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

Review 2.  A topological view of the replicon.

Authors:  Jorge B Schvartzman; Andrzej Stasiak
Journal:  EMBO Rep       Date:  2004-03       Impact factor: 8.807

3.  A new family of bacterial condensins.

Authors:  Zoya M Petrushenko; Weifeng She; Valentin V Rybenkov
Journal:  Mol Microbiol       Date:  2011-07-18       Impact factor: 3.501

4.  An algebraic view of bacterial genome evolution.

Authors:  Andrew R Francis
Journal:  J Math Biol       Date:  2013-12-29       Impact factor: 2.259

Review 5.  The torsional state of DNA within the chromosome.

Authors:  Joaquim Roca
Journal:  Chromosoma       Date:  2011-05-13       Impact factor: 4.316

6.  Direct Evidence for the Formation of Precatenanes during DNA Replication.

Authors:  Jorge Cebrián; Alicia Castán; Víctor Martínez; Maridian J Kadomatsu-Hermosa; Cristina Parra; María José Fernández-Nestosa; Christian Schaerer; Pablo Hernández; Dora B Krimer; Jorge B Schvartzman
Journal:  J Biol Chem       Date:  2015-03-31       Impact factor: 5.157

Review 7.  Maintenance of chromosome structure in Pseudomonas aeruginosa.

Authors:  Valentin V Rybenkov
Journal:  FEMS Microbiol Lett       Date:  2014-06-12       Impact factor: 2.742

Review 8.  DNA supercoiling helps to unlink sister duplexes after replication.

Authors:  Alexander Vologodskii
Journal:  Bioessays       Date:  2010-01       Impact factor: 4.345

9.  Scaling of Linking and Writhing Numbers for Spherically Confined and Topologically Equilibrated Flexible Polymers.

Authors:  John F Marko
Journal:  J Stat Phys       Date:  2011-04       Impact factor: 1.548

10.  Analysis of phage Mu DNA transposition by whole-genome Escherichia coli tiling arrays reveals a complex relationship to distribution of target selection protein B, transcription and chromosome architectural elements.

Authors:  Jun Ge; Zheng Lou; Hong Cui; Lei Shang; Rasika M Harshey
Journal:  J Biosci       Date:  2011-09       Impact factor: 1.826

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