Literature DB >> 10700173

Analysing complex genetic traits with chromosome substitution strains.

J H Nadeau1, J B Singer, A Matin, E S Lander.   

Abstract

Many valuable animal models of human disease are known and new models are continually being generated in existing inbred strains,. Some disease models are simple mendelian traits, but most have a polygenic basis. The current approach to identifying quantitative trait loci (QTLs) that underlie such traits is to localize them in crosses, construct congenic strains carrying individual QTLs, and finally map and clone the genes. This process is time-consuming and expensive, requiring the genotyping of large crosses and many generations of breeding. Here we describe a different approach in which a panel of chromosome substitution strains (CSSs) is used for QTL mapping. Each of these strains has a single chromosome from the donor strain substituting for the corresponding chromosome in the host strain. We discuss the construction, applications and advantages of CSSs compared with conventional crosses for detecting and analysing QTLs, including those that have weak phenotypic effects.

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Year:  2000        PMID: 10700173     DOI: 10.1038/73427

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  167 in total

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2.  Reverse breeding in Arabidopsis thaliana generates homozygous parental lines from a heterozygous plant.

Authors:  Erik Wijnker; Kees van Dun; C Bastiaan de Snoo; Cilia L C Lelivelt; Joost J B Keurentjes; Nazatul Shima Naharudin; Maruthachalam Ravi; Simon W L Chan; Hans de Jong; Rob Dirks
Journal:  Nat Genet       Date:  2012-03-11       Impact factor: 38.330

Review 3.  Functional genomics in rodent models of hypertension.

Authors:  Martin W McBride; Fadi J Charchar; Delyth Graham; William H Miller; Pamela Strahorn; Fiona J Carr; Anna F Dominiczak
Journal:  J Physiol       Date:  2004-01-01       Impact factor: 5.182

Review 4.  The nature and identification of quantitative trait loci: a community's view.

Authors:  Oduola Abiola; Joe M Angel; Philip Avner; Alexander A Bachmanov; John K Belknap; Beth Bennett; Elizabeth P Blankenhorn; David A Blizard; Valerie Bolivar; Gundrun A Brockmann; Kari J Buck; Jean-Francoise Bureau; William L Casley; Elissa J Chesler; James M Cheverud; Gary A Churchill; Melloni Cook; John C Crabbe; Wim E Crusio; Ariel Darvasi; Gerald de Haan; Peter Dermant; R W Doerge; Rosemary W Elliot; Charles R Farber; Lorraine Flaherty; Jonathan Flint; Howard Gershenfeld; John P Gibson; Jing Gu; Weikuan Gu; Heinz Himmelbauer; Robert Hitzemann; Hui-Chen Hsu; Kent Hunter; Fuad F Iraqi; Ritsert C Jansen; Thomas E Johnson; Byron C Jones; Gerd Kempermann; Frank Lammert; Lu Lu; Kenneth F Manly; Douglas B Matthews; Juan F Medrano; Margarete Mehrabian; Guy Mittlemann; Beverly A Mock; Jeffrey S Mogil; Xavier Montagutelli; Grant Morahan; John D Mountz; Hiroki Nagase; Richard S Nowakowski; Bruce F O'Hara; Alexander V Osadchuk; Beverly Paigen; Abraham A Palmer; Jeremy L Peirce; Daniel Pomp; Michael Rosemann; Glenn D Rosen; Leonard C Schalkwyk; Ze'ev Seltzer; Stephen Settle; Kazuhiro Shimomura; Siming Shou; James M Sikela; Linda D Siracusa; Jimmy L Spearow; Cory Teuscher; David W Threadgill; Linda A Toth; Ayo A Toye; Csaba Vadasz; Gary Van Zant; Edward Wakeland; Robert W Williams; Huang-Ge Zhang; Fei Zou
Journal:  Nat Rev Genet       Date:  2003-11       Impact factor: 53.242

5.  Chromosome substitution strains: some quantitative considerations for genome scans and fine mapping.

Authors:  John K Belknap
Journal:  Mamm Genome       Date:  2003-11       Impact factor: 2.957

6.  Marker-assisted congenic screening (MACS): a database tool for the efficient production and characterization of congenic lines.

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Journal:  Mamm Genome       Date:  2003-05       Impact factor: 2.957

7.  Genetic control of obesity, glucose homeostasis, dyslipidemia and fatty liver in a mouse model of diet-induced metabolic syndrome.

Authors:  D S Sinasac; J D Riordan; S H Spiezio; B S Yandell; C M Croniger; J H Nadeau
Journal:  Int J Obes (Lond)       Date:  2015-09-18       Impact factor: 5.095

8.  Genetic loci that control the size of laser-induced choroidal neovascularization.

Authors:  Kei Nakai; Michael S Rogers; Takashi Baba; Taisaku Funakoshi; Amy E Birsner; Dema S Luyindula; Robert J D'Amato
Journal:  FASEB J       Date:  2009-02-23       Impact factor: 5.191

9.  Brain tumor susceptibility: the role of genetic factors and uses of mouse models to unravel risk.

Authors:  Karlyne M Reilly
Journal:  Brain Pathol       Date:  2009-01       Impact factor: 6.508

10.  A complex interaction of imprinted and maternal-effect genes modifies sex determination in Odd Sex (Ods) mice.

Authors:  Christophe Poirier; Yangjun Qin; Carolyn P Adams; Yanett Anaya; Jonathan B Singer; Annie E Hill; Eric S Lander; Joseph H Nadeau; Colin E Bishop
Journal:  Genetics       Date:  2004-11       Impact factor: 4.562

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