Literature DB >> 10698456

The influence of modified purine bases on the stability of parallel DNA.

F Seela1, C Wei, G Becher, M Zulauf, P Leonard.   

Abstract

The stability of the parallel-stranded (ps) DNA duplexes is increased when the dA-residues are replaced by the 7-substituted 7-deaza-2'-deoxyadenosine derivatives 3a,b or the dG-residues by the 8-aza-7-deazapurine 2'-deoxynucleosides 6 and 7a,b. Also the N-7-glycosylated adenine 5 forms stable base pairs in ps-DNA while it destabilizes oligonucleotide duplexes with antiparallel chain orientation. The presence of a 2-amino group as in compound 4b is critical for the DNA-structure, leading to a much greater destabilization of the ps-hybrids than of aps-DNA.

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Year:  2000        PMID: 10698456     DOI: 10.1016/s0960-894x(99)00679-4

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  3 in total

1.  Investigations Into Chemically Stabilized Four-Letter DNA for DNA-Encoded Chemistry.

Authors:  Marco Potowski; Verena B K Kunig; Lukas Eberlein; Mateja Klika Škopić; Alexandros Vakalopoulos; Stefan M Kast; Andreas Brunschweiger
Journal:  Front Chem       Date:  2022-06-09       Impact factor: 5.545

2.  The base pairing properties of 8-aza-7-deaza-2'-deoxyisoguanosine and 7-halogenated derivatives in oligonucleotide duplexes with parallel and antiparallel chain orientation.

Authors:  Frank Seela; Rita Kröschel
Journal:  Nucleic Acids Res       Date:  2003-12-15       Impact factor: 16.971

3.  pH-Dependent mismatch discrimination of oligonucleotide duplexes containing 2'-deoxytubercidin and 2- or 7-substituted derivatives: protonated base pairs formed between 7-deazapurines and cytosine.

Authors:  Xiaohua Peng; Hong Li; Frank Seela
Journal:  Nucleic Acids Res       Date:  2006-10-27       Impact factor: 16.971

  3 in total

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