Literature DB >> 10679726

Noninvasive determination of genome size and ploidy level in fishes by flow cytometry: detection of triploid Poecilia formosa.

D K Lamatsch1, C Steinlein, M Schmid, M Schartl.   

Abstract

BACKGROUND: In order to understand the evolutionary significance of single triploids among the mostly diploid Poecilia formosa we have developed a simple, noninvasive technique for DNA content and ploidy determination.
METHODS: From dorsal fin clips of 14 different fish species single cell suspensions were obtained by chopping the material in 2.1% citric acid/0.5% Tween20, passing it through a 0. 6-gauge needle and incubating it for 20 min at room temperature (RT) with gentle agitation. After overnight fixation in 70% ethanol, the cells were treated with 1ml 0.5% pepsin/0.1 M HCl for 15 min at RT before adding DAPI to a final volume of 2 ml. The cells were stained for 1-3 h and then analyzed by flow cytometry.
RESULTS: We obtained good measurements with CVs ranging from 1.23% to 3.36%. The poeciliid species measured contain from 1.6 to 2.0 pg/nucleus, Oryzias latipes (Medaka) exhibits a nuclear DNA content of 2.2 pg, Danio rerio (zebrafish) 4.6 pg, Tetraodon fluviatilis (freshwater fugu) 0.70 pg. All values except zebrafish are in good agreement with the literature.
CONCLUSIONS: The identification of living specimens of different ploidy for breeding experiments, behavioral studies and tissue transplantations is now made possible. With slight modifications the method can be extended to a field technique, providing therefore a useful tool for a variety of researchers. Copyright 2000 Wiley-Liss, Inc.

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Year:  2000        PMID: 10679726     DOI: 10.1002/(sici)1097-0320(20000201)39:2<91::aid-cyto1>3.0.co;2-4

Source DB:  PubMed          Journal:  Cytometry        ISSN: 0196-4763


  25 in total

1.  Detection of mutations in transgenic fish carrying a bacteriophage lambda cII transgene target.

Authors:  R N Winn; M B Norris; K J Brayer; C Torres; S L Muller
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

2.  Real-time PCR-based method for the estimation of genome sizes.

Authors:  Jochen Wilhelm; Alfred Pingoud; Meinhard Hahn
Journal:  Nucleic Acids Res       Date:  2003-05-15       Impact factor: 16.971

3.  Alterations in enzyme activities in vital organs of triploid female catfish Heteropneustes fossilis (Bloch).

Authors:  Angshuman Biswas; Mitali Pramanik; Samita Kundu; Sumedha Roy; Jhuma De; Arun Kumar Ray
Journal:  Fish Physiol Biochem       Date:  2006-03       Impact factor: 2.794

4.  Making it on their own: sperm-dependent hybrid fishes (Cobitis) switch the sexual hosts and expand beyond the ranges of their original sperm donors.

Authors:  Lukás Choleva; Apostolos Apostolou; Petr Rab; Karel Janko
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-09-12       Impact factor: 6.237

Review 5.  Classical and molecular cytogenetics of the zebrafish, Danio rerio (Cyprinidae, Cypriniformes): an overview.

Authors:  L Sola; E Gornung
Journal:  Genetica       Date:  2001       Impact factor: 1.082

6.  Burst speciation processes and genomic expansion in the neotropical annual killifish genus Austrolebias (Cyprinodontiformes, Rivulidae).

Authors:  G García; V Gutiérrez; N Ríos; B Turner; F Santiñaque; B López-Carro; G Folle
Journal:  Genetica       Date:  2014-01-23       Impact factor: 1.082

7.  Flow cytometric determination of genome size in European sunbleak Leucaspius delineatus (Heckel, 1843).

Authors:  Marta Filipiak; Grzegorz Tylko; Wincenty Kilarski
Journal:  Fish Physiol Biochem       Date:  2011-05-26       Impact factor: 2.794

8.  Reproductive dynamics shapes genomotype composition in an allopolyploid complex.

Authors:  M Morgado-Santos; S Carona; M F Magalhães; L Vicente; M J Collares-Pereira
Journal:  Proc Biol Sci       Date:  2016-05-25       Impact factor: 5.349

9.  A medaka gene map: the trace of ancestral vertebrate proto-chromosomes revealed by comparative gene mapping.

Authors:  Kiyoshi Naruse; Minoru Tanaka; Kazuei Mita; Akihiro Shima; John Postlethwait; Hiroshi Mitani
Journal:  Genome Res       Date:  2004-04-12       Impact factor: 9.043

10.  DNA content of hepatocyte and erythrocyte nuclei of the spined loach (Cobitis taenia L.) and its polyploid forms.

Authors:  Dorota Juchno; Bozena Lackowska; Alicja Boron; Wincenty Kilarski
Journal:  Fish Physiol Biochem       Date:  2009-04-18       Impact factor: 2.794

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