Literature DB >> 24452909

Burst speciation processes and genomic expansion in the neotropical annual killifish genus Austrolebias (Cyprinodontiformes, Rivulidae).

G García1, V Gutiérrez, N Ríos, B Turner, F Santiñaque, B López-Carro, G Folle.   

Abstract

The extent to which genome sizes and other nucleotypic factors influence the phyletic diversification of lineages has long been discussed but remains largely unresolved. In the present work, we present evidence that the genomes of at least 16 species of the neotropical rivulid killifish genus Austrolebias are unusually large, with an average DNA content of about 5.95 ± 0.45 picograms per diploid cell (mean C-value of about 2.98 pg). They are thus larger than the genomes of very nearly all other diploid, i.e. non-(paleo) polyploid species of actinopterygian fishes so far reported. Austrolebias species appear to be conventional diploids in all other respects and there is no reason to believe that they arise from polyploid ancestors. The genome sizes reported for other rivulid killifishes, including a putative sister group, are considerably smaller and fall within the range typical of most other cyprinodontoid species. Therefore, it appears that the ancestor(s) of contemporary Austrolebias have undergone one or more episodes of genome expansion encompassing sudden speciation process during the Pleistocene. In addition, these findings are consistent with the hypothesis of a positive correlation between species richness and genome size.

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Year:  2014        PMID: 24452909     DOI: 10.1007/s10709-014-9756-7

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  21 in total

1.  Chromosome evolution in the annual killifish genus Cynolebias and mitochondrial phylogenetic analysis.

Authors:  G García; A I Lalanne; G Aguirre; M Cappetta
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

2.  Cladogenetic correlates of genomic expansions in the recent evolution of actinopterygiian fishes.

Authors:  Judith E Mank; John C Avise
Journal:  Proc Biol Sci       Date:  2006-01-07       Impact factor: 5.349

Review 3.  Jumping genes and epigenetics: Towards new species.

Authors:  Rita Rebollo; Béatrice Horard; Benjamin Hubert; Cristina Vieira
Journal:  Gene       Date:  2010-01-25       Impact factor: 3.688

4.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

5.  Genome size and GC-percent in vertebrates as determined by flow cytometry: the triangular relationship.

Authors:  A E Vinogradov
Journal:  Cytometry       Date:  1998-02-01

6.  The general stochastic model of nucleotide substitution.

Authors:  F Rodríguez; J L Oliver; A Marín; J R Medina
Journal:  J Theor Biol       Date:  1990-02-22       Impact factor: 2.691

7.  The developmental biology of annual fishes. II. Naturally occurring dispersion and reaggregation of blastomers during the development of annual fish eggs.

Authors:  J P Wourms
Journal:  J Exp Zool       Date:  1972-11

8.  Proliferation zones in the brain of adult fish Austrolebias (Cyprinodontiform: Rivulidae): a comparative study.

Authors:  A S Fernández; J C Rosillo; G Casanova; S Olivera-Bravo
Journal:  Neuroscience       Date:  2011-06-06       Impact factor: 3.590

9.  Genome Size and Species Diversification.

Authors:  Ken Kraaijeveld
Journal:  Evol Biol       Date:  2010-09-17       Impact factor: 3.119

10.  High tandem repeat content in the genome of the short-lived annual fish Nothobranchius furzeri: a new vertebrate model for aging research.

Authors:  Kathrin Reichwald; Chris Lauber; Indrajit Nanda; Jeanette Kirschner; Nils Hartmann; Susanne Schories; Ulrike Gausmann; Stefan Taudien; Markus B Schilhabel; Karol Szafranski; Gernot Glöckner; Michael Schmid; Alessandro Cellerino; Manfred Schartl; Christoph Englert; Matthias Platzer
Journal:  Genome Biol       Date:  2009-02-11       Impact factor: 13.583

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  6 in total

1.  Next-generation sequencing detects repetitive elements expansion in giant genomes of annual killifish genus Austrolebias (Cyprinodontiformes, Rivulidae).

Authors:  G García; N Ríos; V Gutiérrez
Journal:  Genetica       Date:  2015-03-20       Impact factor: 1.082

Review 2.  Living in Temporary Ponds Loading Giant Genomes: The Neotropical Annual Killifish Genus Austrolebias as New Outstanding Evolutionary Model.

Authors:  Graciela García; Verónica Gutiérrez; Néstor Ríos
Journal:  Front Genet       Date:  2022-06-20       Impact factor: 4.772

3.  First complete mitochondrial genome of the South American annual fish Austrolebias charrua (Cyprinodontiformes: Rivulidae): peculiar features among cyprinodontiforms mitogenomes.

Authors:  Verónica Gutiérrez; Natalia Rego; Hugo Naya; Graciela García
Journal:  BMC Genomics       Date:  2015-10-28       Impact factor: 3.969

4.  Chromosomal organization of four classes of repetitive DNA sequences in killifish Orestias ascotanensis Parenti, 1984 (Cyprinodontiformes, Cyprinodontidae).

Authors:  Cristian Araya-Jaime; Natalia Lam; Irma Vila Pinto; Marco A Méndez; Patricia Iturra
Journal:  Comp Cytogenet       Date:  2017-07-25       Impact factor: 1.800

5.  Transcriptome-Based SNP Discovery and Validation in the Hybrid Zone of the Neotropical Annual Fish Genus Austrolebias.

Authors:  Graciela García; Néstor Ríos; Verónica Gutiérrez; Sebastián Serra; Marcelo Loureiro
Journal:  Genes (Basel)       Date:  2019-10-11       Impact factor: 4.096

6.  An endangered new species of seasonal killifish of the genus Austrolebias (Cyprinodontiformes: Aplocheiloidei) from the Bermejo river basin in the Western Chacoan Region.

Authors:  Felipe Alonso; Guillermo Enrique Terán; Pablo Calviño; Ignacio García; Yamila Cardoso; Graciela García
Journal:  PLoS One       Date:  2018-05-16       Impact factor: 3.240

  6 in total

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