Literature DB >> 10669736

Transient expression of cellular polypyrimidine-tract binding protein stimulates cap-independent translation directed by both picornaviral and flaviviral internal ribosome entry sites In vivo.

R Gosert1, K H Chang, R Rijnbrand, M Yi, D V Sangar, S M Lemon.   

Abstract

The regulation of cap-independent translation directed by the internal ribosome entry sites (IRESs) present in some viral and cellular RNAs is poorly understood. Polypyrimidine-tract binding protein (PTB) binds specifically to several viral IRESs. IRES-directed translation may be reduced in cell-free systems that are depleted of PTB and restored by reconstitution of lysates with recombinant PTB. However, there are no data concerning the effects of PTB on IRES-directed translation in vivo. We transfected cells with plasmids expressing dicistronic transcripts in which the upstream cistron encoded PTB or PTB deletion mutants (including a null mutant lacking amino acid residues 87 to 531). The downstream cistron encoded a reporter protein (chloramphenicol acetyltransferase [CAT]) under translational control of the poliovirus IRES which was placed within the intercistronic space. In transfected BS-C-1 cells, transcripts expressing wild-type PTB produced 12-fold more reporter protein than similar transcripts encoding the PTB null mutant. There was a 2.4-fold difference in CAT produced from these transcripts in HeLa cells, which contain a greater natural abundance of PTB. PTB similarly stimulated CAT production from transcripts containing the IRES of hepatitis A virus or hepatitis C virus in BS-C-1 cells and Huh-7 cells (37- to 44-fold increase and 5 to 5.3-fold increase, respectively). Since PTB had no quantitative or qualitative effect on transcription from these plasmids, we conclude that PTB stimulates translation of representative picornaviral and flaviviral RNAs in vivo. This is likely to reflect the stabilization of higher ordered RNA structures within the IRES and was not observed with PTB mutants lacking RNA recognition motifs located in the C-terminal third of the molecule.

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Year:  2000        PMID: 10669736      PMCID: PMC85342          DOI: 10.1128/MCB.20.5.1583-1595.2000

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  82 in total

1.  Role of an inhibitory pyrimidine element and polypyrimidine tract binding protein in repression of a regulated alpha-tropomyosin exon.

Authors:  C Gooding; G C Roberts; C W Smith
Journal:  RNA       Date:  1998-01       Impact factor: 4.942

2.  Polypyrimidine-tract binding protein (PTB) is necessary, but not sufficient, for efficient internal initiation of translation of human rhinovirus-2 RNA.

Authors:  S L Hunt; R J Jackson
Journal:  RNA       Date:  1999-03       Impact factor: 4.942

3.  Polypyrimidine tract binding protein functions as a repressor to regulate alternative splicing of alpha-actinin mutally exclusive exons.

Authors:  J Southby; C Gooding; C W Smith
Journal:  Mol Cell Biol       Date:  1999-04       Impact factor: 4.272

4.  unr, a cellular cytoplasmic RNA-binding protein with five cold-shock domains, is required for internal initiation of translation of human rhinovirus RNA.

Authors:  S L Hunt; J J Hsuan; N Totty; R J Jackson
Journal:  Genes Dev       Date:  1999-02-15       Impact factor: 11.361

5.  Translation of glucose-regulated protein 78/immunoglobulin heavy-chain binding protein mRNA is increased in poliovirus-infected cells at a time when cap-dependent translation of cellular mRNAs is inhibited.

Authors:  P Sarnow
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

6.  Hepatitis A virus translation is rate-limiting for virus replication in MRC-5 cells.

Authors:  A W Funkhouser; D E Schultz; S M Lemon; R H Purcell; S U Emerson
Journal:  Virology       Date:  1999-02-15       Impact factor: 3.616

7.  An internal polypyrimidine-tract-binding protein-binding site in the hepatitis C virus RNA attenuates translation, which is relieved by the 3'-untranslated sequence.

Authors:  T Ito; M M Lai
Journal:  Virology       Date:  1999-02-15       Impact factor: 3.616

8.  The polypyrimidine tract binding protein (PTB) requirement for internal initiation of translation of cardiovirus RNAs is conditional rather than absolute.

Authors:  A Kaminski; R J Jackson
Journal:  RNA       Date:  1998-06       Impact factor: 4.942

9.  Polypyrimidine tract-binding protein positively regulates inclusion of an alternative 3'-terminal exon.

Authors:  H Lou; D M Helfman; R F Gagel; S M Berget
Journal:  Mol Cell Biol       Date:  1999-01       Impact factor: 4.272

10.  Dominant negative mutants of mammalian translation initiation factor eIF-4A define a critical role for eIF-4F in cap-dependent and cap-independent initiation of translation.

Authors:  A Pause; N Méthot; Y Svitkin; W C Merrick; N Sonenberg
Journal:  EMBO J       Date:  1994-03-01       Impact factor: 11.598

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  46 in total

1.  Translation of polioviral mRNA is inhibited by cleavage of polypyrimidine tract-binding proteins executed by polioviral 3C(pro).

Authors:  Sung Hoon Back; Yoon Ki Kim; Woo Jae Kim; Sungchan Cho; Hoe Rang Oh; Jung-Eun Kim; Sung Key Jang
Journal:  J Virol       Date:  2002-03       Impact factor: 5.103

Review 2.  Polypyrimidine tract binding protein antagonizes exon definition.

Authors:  E J Wagner; M A Garcia-Blanco
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

3.  Identification of cellular proteins enhancing activities of internal ribosomal entry sites by competition with oligodeoxynucleotides.

Authors:  Kobong Choi; Jong Heon Kim; Xiaoyu Li; Ki Young Paek; Sang Hoon Ha; Sung Ho Ryu; Eckard Wimmer; Sung Key Jang
Journal:  Nucleic Acids Res       Date:  2004-02-23       Impact factor: 16.971

4.  Proximity of the poly(A)-binding protein to a premature termination codon inhibits mammalian nonsense-mediated mRNA decay.

Authors:  Ana Luísa Silva; Patrícia Ribeiro; Angela Inácio; Stephen A Liebhaber; Luísa Romão
Journal:  RNA       Date:  2008-01-29       Impact factor: 4.942

5.  Viral subversion of host functions for picornavirus translation and RNA replication.

Authors:  Amanda J Chase; Bert L Semler
Journal:  Future Virol       Date:  2012-02       Impact factor: 1.831

6.  Identification of a motif that mediates polypyrimidine tract-binding protein-dependent internal ribosome entry.

Authors:  Sally A Mitchell; Keith A Spriggs; Martin Bushell; Joanne R Evans; Mark Stoneley; John P C Le Quesne; Ruth V Spriggs; Anne E Willis
Journal:  Genes Dev       Date:  2005-07-01       Impact factor: 11.361

7.  A cross-kingdom internal ribosome entry site reveals a simplified mode of internal ribosome entry.

Authors:  Ilya M Terenin; Sergei E Dmitriev; Dmitri E Andreev; Elizabeth Royall; Graham J Belsham; Lisa O Roberts; Ivan N Shatsky
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

8.  Cell-type-specific repression of internal ribosome entry site activity by double-stranded RNA-binding protein 76.

Authors:  Melinda K Merrill; Elena Y Dobrikova; Matthias Gromeier
Journal:  J Virol       Date:  2006-04       Impact factor: 5.103

Review 9.  Insights into the biology of IRES elements through riboproteomic approaches.

Authors:  Almudena Pacheco; Encarnacion Martinez-Salas
Journal:  J Biomed Biotechnol       Date:  2010-02-02

Review 10.  Viral and host proteins involved in picornavirus life cycle.

Authors:  Jing-Yi Lin; Tzu-Chun Chen; Kuo-Feng Weng; Shih-Cheng Chang; Li-Lien Chen; Shin-Ru Shih
Journal:  J Biomed Sci       Date:  2009-11-20       Impact factor: 8.410

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