Literature DB >> 10668803

In vivo misreading by tRNA overdose.

F Navarro1, P Thuriaux.   

Abstract

Rpb5-H147R is an AT-GC transition replacing CAC(His) by CGC(Arg) at a conserved and critical position of ABC27 (Rpb5p), one of the five common and essential subunits shared by all three eukaryotic RNA polymerases. This mutation is viable at 25 degrees C, but has a lethal phenotype at 34 degrees C. A search for dosage-dependent suppressors identified five distinct clones that all bear a copy of the tRNA(His)GUG gene. Suppression was also observed with a small genomic insert bearing this tRNA gene and no other coding sequences, under conditions where there is a sevenfold increase in the cellular concentration of tRNA(His)GUG. Overexpressing tRNA(Arg)ICG, which normally decodes the suppressed CGC codon, counteracted suppression. Suppression is codon specific because it was abolished when replacing CGC by its synonymous codons CGA, CGU, or AGA, but was not detectably affected by several nucleotide substitutions modifying the surrounding sequence and is thus largely insensitive to the nucleotide context. It is proposed that overexpressing tRNA(His)GUG extends its decoding properties from CAC(His) to the noncognate CGC(Arg) codon through an illegitimate U x G pairing at the middle base of the anticodon. Accordingly, tRNA(His)GUG would compete with tRNA(Arg)ICG for chain elongation and generate a significant level of misreading errors under normal growth conditions.

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Year:  2000        PMID: 10668803      PMCID: PMC1369898          DOI: 10.1017/s1355838200991714

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  45 in total

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8.  Novel features in the genetic code and codon reading patterns in Neurospora crassa mitochondria based on sequences of six mitochondrial tRNAs.

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  7 in total

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2.  Imbalance of tRNA(Pro) isoacceptors induces +1 frameshifting at near-cognate codons.

Authors:  Michael O'Connor
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

3.  In vitro selection for sense codon suppression.

Authors:  Adam Frankel; Richard W Roberts
Journal:  RNA       Date:  2003-07       Impact factor: 4.942

Review 4.  The pleiotropic cell separation mutation spl1-1 is a nucleotide substitution in the internal promoter of the proline tRNACGG gene of Schizosaccharomyces pombe.

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5.  Functional organization of the Rpb5 subunit shared by the three yeast RNA polymerases.

Authors:  Cécile Zaros; Jean-François Briand; Yves Boulard; Sylvie Labarre-Mariotte; M Carmen Garcia-Lopez; Pierre Thuriaux; Francisco Navarro
Journal:  Nucleic Acids Res       Date:  2006-12-19       Impact factor: 16.971

6.  Activation of a chimeric Rpb5/RpoH subunit using library selection.

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Review 7.  Rpb5, a subunit shared by eukaryotic RNA polymerases, cooperates with prefoldin-like Bud27/URI.

Authors:  Verónica Martínez-Fernández; Francisco Navarro
Journal:  AIMS Genet       Date:  2018-02-27
  7 in total

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