Literature DB >> 10666586

Overexpression, purification, crystallization and preliminary structural study of dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD), the fourth enzyme of the dTDP-L-rhamnose synthesis pathway, from Salmonella enterica serovar Typhimurium.

M F Giraud1, H J McMiken, G A Leonard, P Messner, C Whitfield, J H Naismith.   

Abstract

L-Rhamnose is an essential component of the cell wall of many pathogenic bacteria. Its precursor, dTDP-L-rhamnose, is synthesized from alpha-D-glucose-1-phosphate and dTTP via a pathway requiring four distinct enzymes: RmlA, RmlB, RmlC and RmlD. RmlD catalyses the terminal step of this pathway by converting dTDP-6-deoxy-L-lyxo-4-hexulose to dTDP-L-rhamnose. RmlD from -Salmonella enterica serovar Typhimurium has been overexpressed in Escherichia coli. The recombinant protein was purified by a two--step protocol involving anion-exchange and hydrophobic chromatography. Dynamic light-scattering experiments indicated that the recombinant protein is monodisperse. Crystals of native and selenomethionine-enriched RmlD have been obtained using the sitting-drop vapour-diffusion method with polyethylene glycol as precipitant. Diffraction data have been collected from orthorhombic crystals of both native and selenomethionyl-derivatized protein, allowing tracing of the protein structure.

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Year:  1999        PMID: 10666586     DOI: 10.1107/s0907444999012251

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  14 in total

1.  The structural basis of the catalytic mechanism and regulation of glucose-1-phosphate thymidylyltransferase (RmlA).

Authors:  W Blankenfeldt; M Asuncion; J S Lam; J H Naismith
Journal:  EMBO J       Date:  2000-12-15       Impact factor: 11.598

2.  Formation of dTDP-rhamnose is essential for growth of mycobacteria.

Authors:  Yufang Ma; Fei Pan; Michael McNeil
Journal:  J Bacteriol       Date:  2002-06       Impact factor: 3.490

3.  Identification of an L-rhamnose synthetic pathway in two nucleocytoplasmic large DNA viruses.

Authors:  Madhu Parakkottil Chothi; Garry A Duncan; Andrea Armirotti; Chantal Abergel; James R Gurnon; James L Van Etten; Cinzia Bernardi; Gianluca Damonte; Michela Tonetti
Journal:  J Virol       Date:  2010-06-10       Impact factor: 5.103

4.  Molecular analysis of the Enterobacter sakazakii O-antigen gene locus.

Authors:  N Mullane; P O'Gaora; J E Nally; C Iversen; P Whyte; P G Wall; S Fanning
Journal:  Appl Environ Microbiol       Date:  2008-04-25       Impact factor: 4.792

5.  Genetic analysis of the Cronobacter sakazakii O4 to O7 O-antigen gene clusters and development of a PCR assay for identification of all C. sakazakii O serotypes.

Authors:  Yamin Sun; Min Wang; Quan Wang; Boyang Cao; Xin He; Kun Li; Lu Feng; Lei Wang
Journal:  Appl Environ Microbiol       Date:  2012-03-23       Impact factor: 4.792

6.  Drug targeting Mycobacterium tuberculosis cell wall synthesis: genetics of dTDP-rhamnose synthetic enzymes and development of a microtiter plate-based screen for inhibitors of conversion of dTDP-glucose to dTDP-rhamnose.

Authors:  Y Ma; R J Stern; M S Scherman; V D Vissa; W Yan; V C Jones; F Zhang; S G Franzblau; W H Lewis; M R McNeil
Journal:  Antimicrob Agents Chemother       Date:  2001-05       Impact factor: 5.191

7.  Homologous Recombination in Core Genomes Facilitates Marine Bacterial Adaptation.

Authors:  Ying Sun; Haiwei Luo
Journal:  Appl Environ Microbiol       Date:  2018-05-17       Impact factor: 4.792

8.  The Aeromonas hydrophila wb*O34 gene cluster: genetics and temperature regulation.

Authors:  Natalia Jimenez; Rocío Canals; María Teresa Saló; Silvia Vilches; Susana Merino; Juan M Tomás
Journal:  J Bacteriol       Date:  2008-04-11       Impact factor: 3.490

9.  Non-enzymatic pyridine ring formation in the biosynthesis of the rubrolone tropolone alkaloids.

Authors:  Yijun Yan; Jing Yang; Zhiyin Yu; Mingming Yu; Ya-Tuan Ma; Li Wang; Can Su; Jianying Luo; Geoffrey P Horsman; Sheng-Xiong Huang
Journal:  Nat Commun       Date:  2016-10-07       Impact factor: 14.919

10.  Identification of a dTDP-rhamnose biosynthetic pathway that oscillates with the molting cycle in Caenorhabditis elegans.

Authors:  Likui Feng; Qingyao Shou; Rebecca A Butcher
Journal:  Biochem J       Date:  2016-03-23       Impact factor: 3.857

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