Literature DB >> 10639119

Highly mutagenic replication by DNA polymerase V (UmuC) provides a mechanistic basis for SOS untargeted mutagenesis.

A Maor-Shoshani1, N B Reuven, G Tomer, Z Livneh.   

Abstract

When challenged by DNA-damaging agents, Escherichia coli cells respond by inducing the SOS stress response, which leads to an increase in mutation frequency by two mechanisms: translesion replication, a process that causes mutations because of misinsertion opposite the lesions, and an inducible mutator activity, which acts at undamaged sites. Here we report that DNA polymerase V (pol V; UmuC), which previously has been shown to be a lesion-bypass DNA polymerase, was highly mutagenic during in vitro gap-filling replication of a gapped plasmid carrying the cro reporter gene. This reaction required, in addition to pol V, UmuD', RecA, and single-stranded DNA (ssDNA)-binding protein. pol V produced point mutations at a frequency of 2.1 x 10(-4) per nucleotide (2.1% per cro gene), 41-fold higher than DNA polymerase III holoenzyme. The mutational spectrum of pol V was dominated by transversions (53%), which were formed at a frequency of 1.3 x 10(-4) per nucleotide (1. 1% per cro gene), 74-fold higher than with pol III holoenzyme. The prevalence of transversions and the protein requirements of this system are similar to those of in vivo untargeted mutagenesis (SOS mutator activity). This finding suggests that replication by pol V, in the presence of UmuD', RecA, and ssDNA-binding protein, is the basis of chromosomal SOS untargeted mutagenesis.

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Year:  2000        PMID: 10639119      PMCID: PMC15370          DOI: 10.1073/pnas.97.2.565

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  48 in total

1.  The mutagenesis protein UmuC is a DNA polymerase activated by UmuD', RecA, and SSB and is specialized for translesion replication.

Authors:  N B Reuven; G Arad; A Maor-Shoshani; Z Livneh
Journal:  J Biol Chem       Date:  1999-11-05       Impact factor: 5.157

2.  SV40 DNA: quantitative conversion of closed circular to open circular form by an ethidium bromide-restricted endonuclease.

Authors:  R Barzilai
Journal:  J Mol Biol       Date:  1973-03-15       Impact factor: 5.469

3.  Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday.

Authors:  G Streisinger; Y Okada; J Emrich; J Newton; A Tsugita; E Terzaghi; M Inouye
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1966

Review 4.  Ultraviolet mutagenesis and inducible DNA repair in Escherichia coli.

Authors:  E M Witkin
Journal:  Bacteriol Rev       Date:  1976-12

Review 5.  The SOS regulatory system of Escherichia coli.

Authors:  J W Little; D W Mount
Journal:  Cell       Date:  1982-05       Impact factor: 41.582

6.  A simple and rapid procedure for the large scale purification of the recA protein of Escherichia coli.

Authors:  M M Cox; K McEntee; I R Lehman
Journal:  J Biol Chem       Date:  1981-05-10       Impact factor: 5.157

Review 7.  SOS functions, cancer and inducible evolution.

Authors:  H Echols
Journal:  Cell       Date:  1981-07       Impact factor: 41.582

8.  The dinB gene encodes a novel E. coli DNA polymerase, DNA pol IV, involved in mutagenesis.

Authors:  J Wagner; P Gruz; S R Kim; M Yamada; K Matsui; R P Fuchs; T Nohmi
Journal:  Mol Cell       Date:  1999-08       Impact factor: 17.970

9.  Postreplication repair defects in mutants of Drosophila melanogaster.

Authors:  J B Boyd; K E Shaw
Journal:  Mol Gen Genet       Date:  1982

10.  DNA-damaging agents stimulate gene expression at specific loci in Escherichia coli.

Authors:  C J Kenyon; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  1980-05       Impact factor: 11.205

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  38 in total

1.  Domain structure, localization, and function of DNA polymerase eta, defective in xeroderma pigmentosum variant cells.

Authors:  P Kannouche; B C Broughton; M Volker; F Hanaoka; L H Mullenders; A R Lehmann
Journal:  Genes Dev       Date:  2001-01-15       Impact factor: 11.361

2.  The many faces of DNA polymerases: strategies for mutagenesis and for mutational avoidance.

Authors:  E C Friedberg; W J Feaver; V L Gerlach
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

Review 3.  Hypermutation in bacteria and other cellular systems.

Authors:  B A Bridges
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-01-29       Impact factor: 6.237

4.  Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta.

Authors:  F Boudsocq; S Iwai; F Hanaoka; R Woodgate
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

5.  Posttranslational modification of the umuD-encoded subunit of Escherichia coli DNA polymerase V regulates its interactions with the beta processivity clamp.

Authors:  Mark D Sutton; Issay Narumi; Graham C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

6.  Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).

Authors:  A E Ferentz; G C Walker; G Wagner
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

7.  Lack of strand bias in UV-induced mutagenesis in Escherichia coli.

Authors:  Damian Gawel; Magdalena Maliszewska-Tkaczyk; Piotr Jonczyk; Roel M Schaaper; Iwona J Fijalkowska
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

8.  Defining the position of the switches between replicative and bypass DNA polymerases.

Authors:  Shingo Fujii; Robert P Fuchs
Journal:  EMBO J       Date:  2004-10-07       Impact factor: 11.598

9.  Nascent DNA processing by RecJ favors lesion repair over translesion synthesis at arrested replication forks in Escherichia coli.

Authors:  Charmain T Courcelle; Kin-Hoe Chow; Andrew Casey; Justin Courcelle
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-05       Impact factor: 11.205

10.  Roles of YqjH and YqjW, homologs of the Escherichia coli UmuC/DinB or Y superfamily of DNA polymerases, in stationary-phase mutagenesis and UV-induced mutagenesis of Bacillus subtilis.

Authors:  Huang-Mo Sung; Gabriel Yeamans; Christian A Ross; Ronald E Yasbin
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

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