Literature DB >> 10631326

Crystal structure of Escherichia coli UvrB C-terminal domain, and a model for UvrB-uvrC interaction.

M Sohi1, A Alexandrovich, G Moolenaar, R Visse, N Goosen, X Vernede, J C Fontecilla-Camps, J Champness, M R Sanderson.   

Abstract

A crystal structure of the C-terminal domain of Escherichia coli UvrB (UvrB') has been solved to 3.0 A resolution. The domain adopts a helix-loop-helix fold which is stabilised by the packing of hydrophobic side-chains between helices. From the UvrB' fold, a model for a domain of UvrC (UvrC') that has high sequence homology with UvrB' has been made. In the crystal, a dimerisation of UvrB domains is seen involving specific hydrophobic and salt bridge interactions between residues in and close to the loop region of the domain. It is proposed that a homologous mode of interaction may occur between UvrB and UvrC. This interaction is likely to be flexible, potentially spanning > 50 A.

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Year:  2000        PMID: 10631326     DOI: 10.1016/s0014-5793(99)01690-7

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  16 in total

1.  Role of the Escherichia coli nucleotide excision repair proteins in DNA replication.

Authors:  G F Moolenaar; C Moorman; N Goosen
Journal:  J Bacteriol       Date:  2000-10       Impact factor: 3.490

2.  The presence of two UvrB subunits in the UvrAB complex ensures damage detection in both DNA strands.

Authors:  Esther E A Verhoeven; Claire Wyman; Geri F Moolenaar; Nora Goosen
Journal:  EMBO J       Date:  2002-08-01       Impact factor: 11.598

3.  Interactions between UvrA and UvrB: the role of UvrB's domain 2 in nucleotide excision repair.

Authors:  James J Truglio; Deborah L Croteau; Milan Skorvaga; Matthew J DellaVecchia; Karsten Theis; Bhaskar S Mandavilli; Bennett Van Houten; Caroline Kisker
Journal:  EMBO J       Date:  2004-06-10       Impact factor: 11.598

4.  Structural insights into the first incision reaction during nucleotide excision repair.

Authors:  James J Truglio; Benjamin Rhau; Deborah L Croteau; Liqun Wang; Milan Skorvaga; Erkan Karakas; Matthew J DellaVecchia; Hong Wang; Bennett Van Houten; Caroline Kisker
Journal:  EMBO J       Date:  2005-02-03       Impact factor: 11.598

5.  Crystal structure of Bacillus stearothermophilus UvrA provides insight into ATP-modulated dimerization, UvrB interaction, and DNA binding.

Authors:  Danaya Pakotiprapha; Yoshihiko Inuzuka; Brian R Bowman; Geri F Moolenaar; Nora Goosen; David Jeruzalmi; Gregory L Verdine
Journal:  Mol Cell       Date:  2007-12-27       Impact factor: 17.970

6.  Conservation and Divergence in Nucleotide Excision Repair Lesion Recognition.

Authors:  Nicolas Wirth; Jonas Gross; Heide M Roth; Claudia N Buechner; Caroline Kisker; Ingrid Tessmer
Journal:  J Biol Chem       Date:  2016-07-12       Impact factor: 5.157

7.  Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA.

Authors:  X Yu; S A Jacobs; S C West; T Ogawa; E H Egelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

8.  Novel bifunctional nucleases, OmBBD and AtBBD1, are involved in abscisic acid-mediated callose deposition in Arabidopsis.

Authors:  Min Kyoung You; Hyun Young Shin; Young Jin Kim; Sung Han Ok; Sung Ki Cho; Ji Ung Jeung; Sang Dong Yoo; Jeong Kook Kim; Jeong Sheop Shin
Journal:  Plant Physiol       Date:  2009-12-16       Impact factor: 8.340

Review 9.  Prokaryotic nucleotide excision repair.

Authors:  Caroline Kisker; Jochen Kuper; Bennett Van Houten
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

10.  NMR analysis of [methyl-13C]methionine UvrB from Bacillus caldotenax reveals UvrB-domain 4 heterodimer formation in solution.

Authors:  Matthew J DellaVecchia; W Keither Merritt; Ye Peng; Thomas W Kirby; Eugene F DeRose; Geoffrey A Mueller; Bennett Van Houten; Robert E London
Journal:  J Mol Biol       Date:  2007-08-02       Impact factor: 5.469

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