Literature DB >> 10618262

Molecular diversity of Renibacterium salmoninarum isolates determined by randomly amplified polymorphic DNA analysis.

T H Grayson1, F A Atienzar, S M Alexander, L F Cooper, M L Gilpin.   

Abstract

The molecular diversity among 60 isolates of Renibacterium salmoninarum which differ in place and date of isolation was investigated by using randomly amplified polymorphic DNA (RAPD) analysis. Isolates were grouped into 21 banding patterns which did not reflect the biological source. Four 16S-23S rRNA intergenic spacer (ITS1) sequence variations and two alleles of an exact tandem repeat locus, ETR-A, were the bases for formation of distinct groups within the RAPD clusters. This study provides evidence that the most common ITS1 sequence variant, SV1, possesses two copies of a 51-bp repeat unit at ETR-A and has been widely dispersed among countries which are associated with mainstream intensive salmonid culture.

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Year:  2000        PMID： 10618262      PMCID： PMC91844          DOI： 10.1128/AEM.66.1.435-438.2000

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  9 in total

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4.  Mathematical model for studying genetic variation in terms of restriction endonucleases.

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5.  RAPD (arbitrary primer) PCR is more sensitive than multilocus enzyme electrophoresis for distinguishing related bacterial strains.

Authors:  G Wang; T S Whittam; C M Berg; D E Berg
Journal:  Nucleic Acids Res       Date:  1993-12-25       Impact factor: 16.971

6.  Fingerprinting genomes using PCR with arbitrary primers.

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Authors:  Thomas H Grayson; Andrew J Evenden; Martyn L Gilpin; Keith L Martin; Colin B Munn
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8.  Diversity among clinical isolates of Histoplasma capsulatum detected by polymerase chain reaction with arbitrary primers.

Authors:  D Kersulyte; J P Woods; E J Keath; W E Goldman; D E Berg
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9.  Molecular differentiation of Renibacterium salmoninarum isolates from worldwide locations.

Authors:  T H Grayson; L F Cooper; F A Atienzar; M R Knowles; M L Gilpin
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792
  9 in total
  10 in total

1.  Use of randomly amplified polymorphic DNA as a means of developing genus- and strain-specific Streptomyces DNA probes.

Authors:  M A Roberts; D L Crawford
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

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Authors:  Lopamudra Sahoo; B K Das; J Parhi; S C Mukherjee
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3.  Variation in the spacer regions separating tRNA genes in Renibacterium salmoninarum distinguishes recent clinical isolates from the same location.

Authors:  S M Alexander; T H Grayson; E M Chambers; L F Cooper; G A Barker; M L Gilpin
Journal:  J Clin Microbiol       Date:  2001-01       Impact factor: 5.948

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Authors:  T Hilton Grayson; Lynne F Cooper; Annette B Wrathmell; Janet Roper; Andrew J Evenden; Martyn L Gilpin
Journal:  Immunology       Date:  2002-06       Impact factor: 7.397

5.  A single Ala139-to-Glu substitution in the Renibacterium salmoninarum virulence-associated protein p57 results in antigenic variation and is associated with enhanced p57 binding to chinook salmon leukocytes.

Authors:  Gregory D Wiens; Ron Pascho; James R Winton
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

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7.  Protective role of omega-3 polyunsaturated fatty acid against lead acetate-induced toxicity in liver and kidney of female rats.

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Journal:  Biomed Res Int       Date:  2014-06-18       Impact factor: 3.411

8.  Multilocus variable-number tandem-repeat genotyping of Renibacterium salmoninarum, a bacterium causing bacterial kidney disease in salmonid fish.

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Journal:  BMC Microbiol       Date:  2013-12-06       Impact factor: 3.605

9.  Comparative Genomic Analysis of Two Chilean Renibacterium salmoninarum Isolates and the Type Strain ATCC 33209T.

Authors:  Jorn Bethke; Alejandro J Yáñez; Ruben Avendaño-Herrera
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10.  Atlantic Salmon Pre-smolt Survivors of Renibacterium salmoninarum Infection Show Inhibited Cell-Mediated Adaptive Immune Response and a Higher Risk of Death During the Late Stage of Infection at Lower Water Temperatures.

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  10 in total

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