Literature DB >> 10611675

Challenges at the frontiers of structural biology.

A Sali1, J Kuriyan.   

Abstract

Knowledge of the three-dimensional structures of proteins is the key to unlocking the full potential of genomic information. There are two distinct directions along which cutting-edge research in structural biology is currently moving towards this goal. On the one hand, tightly focused long-term research in individual laboratories is leading to the determination of the structures of macromolecular assemblies of ever-increasing size and complexity. On the other hand, large consortia of structural biologists, inspired by the pace of genome sequencing, are developing strategies to determine new protein structures rapidly, so that it will soon be possible to predict reasonably accurate structures for most protein domains. We anticipate that a small number of complex systems, studied in depth, will provide insights across the field of biology with the aid of genome-based comparative structural analysis.

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Year:  1999        PMID: 10611675

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  9 in total

Review 1.  Structural genomics: a pipeline for providing structures for the biologist.

Authors:  Mark R Chance; Anne R Bresnick; Stephen K Burley; Jian-Sheng Jiang; Christopher D Lima; Andrej Sali; Steven C Almo; Jeffrey B Bonanno; John A Buglino; Simon Boulton; Hua Chen; Narayanan Eswar; Guoshun He; Raymond Huang; Valentin Ilyin; Linda McMahan; Ursula Pieper; Soumya Ray; Marc Vidal; Li Kai Wang
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

2.  Constructing and validating initial Cα models from subnanometer resolution density maps with pathwalking.

Authors:  Mariah R Baker; Ian Rees; Steven J Ludtke; Wah Chiu; Matthew L Baker
Journal:  Structure       Date:  2012-03-07       Impact factor: 5.006

3.  SWISS-MODEL: An automated protein homology-modeling server.

Authors:  Torsten Schwede; Jürgen Kopp; Nicolas Guex; Manuel C Peitsch
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

4.  Backbone solution structures of proteins using residual dipolar couplings: application to a novel structural genomics target.

Authors:  H Valafar; K L Mayer; C M Bougault; P D LeBlond; F E Jenney; P S Brereton; M W W Adams; J H Prestegard
Journal:  J Struct Funct Genomics       Date:  2004

5.  Modeling protein structure at near atomic resolutions with Gorgon.

Authors:  Matthew L Baker; Sasakthi S Abeysinghe; Stephen Schuh; Ross A Coleman; Austin Abrams; Michael P Marsh; Corey F Hryc; Troy Ruths; Wah Chiu; Tao Ju
Journal:  J Struct Biol       Date:  2011-02-04       Impact factor: 2.867

Review 6.  Structural and functional insights of Wilson disease copper-transporting ATPase.

Authors:  Negah Fatemi; Bibudhendra Sarkar
Journal:  J Bioenerg Biomembr       Date:  2002-10       Impact factor: 2.945

7.  Exploring CYP1A1 as anticancer target: homology modeling and in silico inhibitor design.

Authors:  Abhay T Sangamwar; Leena B Labhsetwar; Sharad V Kuberkar
Journal:  J Mol Model       Date:  2008-07-30       Impact factor: 1.810

8.  Induced fit docking, pharmacophore modeling, and molecular dynamic simulations on thiazolidinedione derivatives to explore key interactions with Tyr48 in polyol pathway.

Authors:  Manga Vijjulatha; Yamini Lingala; RaviRaja Tejaswi Merugu
Journal:  J Mol Model       Date:  2014-06-29       Impact factor: 1.810

9.  An effective hybrid of hill climbing and genetic algorithm for 2D triangular protein structure prediction.

Authors:  Shih-Chieh Su; Cheng-Jian Lin; Chuan-Kang Ting
Journal:  Proteome Sci       Date:  2011-10-14       Impact factor: 2.480

  9 in total

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