Literature DB >> 10611402

A low resolution model for the interaction of G proteins with G protein-coupled receptors.

L Oliveira1, A C Paiva, G Vriend.   

Abstract

A model is presented for the interaction between G proteins and G protein-coupled receptors. The model is based on the fact that this interaction shows little specificity and thus conserved parts of the G proteins have to interact with conserved parts of the receptors. These parts are a conserved negative residue in the G protein, a fully conserved arginine in the receptor and a series of residues that are not conserved but always hydrophobic like the hydrophobic side of the C-terminal helix of the G protein and the hydrophobic side of a helix in the C-terminal domain of the receptor. Other, mainly cytosolic, factors determine the specificity and regulation of this interaction. The relation between binding and activation will be shown. A large body of experimental evidence supports this model. Despite the fact that the model does not provide atomic resolution, it can be used to explain some experimental data that would otherwise seem inexplicable, and it suggests experiments for its falsification or verification.

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Year:  1999        PMID: 10611402     DOI: 10.1093/protein/12.12.1087

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  11 in total

1.  Lipoic acid stimulates cAMP production via G protein-coupled receptor-dependent and -independent mechanisms.

Authors:  Sonemany Salinthone; Robynn V Schillace; Catherine Tsang; John W Regan; Dennis N Bourdette; Daniel W Carr
Journal:  J Nutr Biochem       Date:  2010-10-30       Impact factor: 6.048

2.  Temporally precise in vivo control of intracellular signalling.

Authors:  Raag D Airan; Kimberly R Thompson; Lief E Fenno; Hannah Bernstein; Karl Deisseroth
Journal:  Nature       Date:  2009-03-18       Impact factor: 49.962

3.  Rice G-protein coupled receptor (GPCR): in silico analysis and transcription regulation under abiotic stress.

Authors:  Dinesh Kumar Yadav; Narendra Tuteja
Journal:  Plant Signal Behav       Date:  2011-08-01

Review 4.  Generic GPCR residue numbers - aligning topology maps while minding the gaps.

Authors:  Vignir Isberg; Chris de Graaf; Andrea Bortolato; Vadim Cherezov; Vsevolod Katritch; Fiona H Marshall; Stefan Mordalski; Jean-Philippe Pin; Raymond C Stevens; Gerrit Vriend; David E Gloriam
Journal:  Trends Pharmacol Sci       Date:  2014-12-22       Impact factor: 14.819

5.  Drug design for ever, from hype to hope.

Authors:  G Seddon; V Lounnas; R McGuire; T van den Bergh; R P Bywater; L Oliveira; G Vriend
Journal:  J Comput Aided Mol Des       Date:  2012-01-18       Impact factor: 3.686

6.  Congenital hypogonadotropic hypogonadism due to GnRH receptor mutations in three brothers reveal sites affecting conformation and coupling.

Authors:  Javier A Tello; Claire L Newton; Jerome Bouligand; Anne Guiochon-Mantel; Robert P Millar; Jacques Young
Journal:  PLoS One       Date:  2012-06-05       Impact factor: 3.240

7.  Whole proteome identification of plant candidate G-protein coupled receptors in Arabidopsis, rice, and poplar: computational prediction and in-vivo protein coupling.

Authors:  Timothy E Gookin; Junhyong Kim; Sarah M Assmann
Journal:  Genome Biol       Date:  2008-07-31       Impact factor: 13.583

Review 8.  Homology modelling and spectroscopy, a never-ending love story.

Authors:  Hanka Venselaar; Robbie P Joosten; Bas Vroling; Coos A B Baakman; Maarten L Hekkelman; Elmar Krieger; Gert Vriend
Journal:  Eur Biophys J       Date:  2009-08-29       Impact factor: 1.733

9.  Motions around conserved helical weak spots facilitate GPCR activation.

Authors:  Janne M Bibbe; Gert Vriend
Journal:  Proteins       Date:  2021-07-26

10.  Alpha-bulges in G protein-coupled receptors.

Authors:  Rob van der Kant; Gert Vriend
Journal:  Int J Mol Sci       Date:  2014-05-06       Impact factor: 5.923

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