Literature DB >> 10606655

Bacillus subtilis LrpC is a sequence-independent DNA-binding and DNA-bending protein which bridges DNA.

A Tapias1, G López, S Ayora.   

Abstract

Genetic evidence suggests that the Bacillus subtilis lrpC gene product participates in cell growth and sporulation. The purified LrpC protein, which has a predicted molecular mass of 16.4 kDa, is a tetramer in solution. LrpC binds with higher affinity ( K (app) approximately 80 nM) to intrinsically curved DNA than to non-curved DNA ( K (app) approximately 700 nM). DNase I footprinting and the supercoiling of relaxed circular plasmid DNA in the presence of topoisomerase I revealed that LrpC induces DNA bending and constrains DNA supercoils in vitro. The LrpC protein cooperatively increases DNA binding of the bona fide DNA-binding and DNA-bending protein Hbsu. LrpC forms inter- and intramolecular bridges on linear and supercoiled DNA molecules, resulting in a large network and DNA compactation. Collectively, these findings suggest that LrpC is an architectural protein and that its activities could provide a means to modulate DNA transactions.

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Year:  2000        PMID: 10606655      PMCID: PMC102501          DOI: 10.1093/nar/28.2.552

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  30 in total

1.  An Lrp-type transcriptional regulator from Agrobacterium tumefaciens condenses more than 100 nucleotides of DNA into globular nucleoprotein complexes.

Authors:  S Jafri; S Evoy; K Cho; H G Craighead; S C Winans
Journal:  J Mol Biol       Date:  1999-05-21       Impact factor: 5.469

2.  The DNA-binding protein HBsu is essential for normal growth and development in Bacillus subtilis.

Authors:  B Micka; M A Marahiel
Journal:  Biochimie       Date:  1992 Jul-Aug       Impact factor: 4.079

3.  Characterization of Lrp, and Escherichia coli regulatory protein that mediates a global response to leucine.

Authors:  D A Willins; C W Ryan; J V Platko; J M Calvo
Journal:  J Biol Chem       Date:  1991-06-15       Impact factor: 5.157

4.  Use of T7 RNA polymerase to direct expression of cloned genes.

Authors:  F W Studier; A H Rosenberg; J J Dunn; J W Dubendorff
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

Review 5.  The leucine-responsive regulatory protein: more than a regulator?

Authors:  R D'Ari; R T Lin; E B Newman
Journal:  Trends Biochem Sci       Date:  1993-07       Impact factor: 13.807

6.  A novel site-specific recombinase encoded by the Streptococcus pyogenes plasmid pSM19035.

Authors:  F Rojo; J C Alonso
Journal:  J Mol Biol       Date:  1994-04-29       Impact factor: 5.469

7.  3-A resolution structure of a protein with histone-like properties in prokaryotes.

Authors:  I Tanaka; K Appelt; J Dijk; S W White; K S Wilson
Journal:  Nature       Date:  1984 Aug 2-8       Impact factor: 49.962

8.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

9.  Alterations in the flow of one-carbon units affect KinB-dependent sporulation in Bacillus subtilis.

Authors:  V Dartois; J Liu; J A Hoch
Journal:  Mol Microbiol       Date:  1997-07       Impact factor: 3.501

10.  Lrp, a major regulatory protein in Escherichia coli, bends DNA and can organize the assembly of a higher-order nucleoprotein structure.

Authors:  Q Wang; J M Calvo
Journal:  EMBO J       Date:  1993-06       Impact factor: 11.598

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  22 in total

1.  Characterization of LrpC DNA-binding properties and regulation of Bacillus subtilis lrpC gene expression.

Authors:  C Beloin; R Exley; A L Mahé; M Zouine; S Cubasch; F Le Hégarat
Journal:  J Bacteriol       Date:  2000-08       Impact factor: 3.490

2.  H-NS mediated compaction of DNA visualised by atomic force microscopy.

Authors:  R T Dame; C Wyman; N Goosen
Journal:  Nucleic Acids Res       Date:  2000-09-15       Impact factor: 16.971

3.  On the role of H-NS in the organization of bacterial chromatin: from bulk to single molecules and back.

Authors:  Remus Thei Dame; Gijs J L Wuite
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

4.  Genome wide, supercoiling-dependent in vivo binding of a viral protein involved in DNA replication and transcriptional control.

Authors:  Víctor González-Huici; Margarita Salas; José M Hermoso
Journal:  Nucleic Acids Res       Date:  2004-04-26       Impact factor: 16.971

5.  The Sac10b homolog in Methanococcus maripaludis binds DNA at specific sites.

Authors:  Yuchen Liu; Li Guo; Rong Guo; Richard L Wong; Hilda Hernandez; Jinchuan Hu; Yindi Chu; I Jonathan Amster; William B Whitman; Li Huang
Journal:  J Bacteriol       Date:  2009-01-23       Impact factor: 3.490

6.  Identification, cloning and characterization of a new DNA-binding protein from the hyperthermophilic methanogen Methanopyrus kandleri.

Authors:  Nikolai A Pavlov; Dmitry I Cherny; Igor V Nazimov; Alexei I Slesarev; Vinod Subramaniam
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

Review 7.  Bacterial nucleoid-associated proteins, nucleoid structure and gene expression.

Authors:  Shane C Dillon; Charles J Dorman
Journal:  Nat Rev Microbiol       Date:  2010-02-08       Impact factor: 60.633

8.  Novel mechanism of gene regulation: the protein Rv1222 of Mycobacterium tuberculosis inhibits transcription by anchoring the RNA polymerase onto DNA.

Authors:  Paulami Rudra; Ranjit Kumar Prajapati; Rajdeep Banerjee; Shreya Sengupta; Jayanta Mukhopadhyay
Journal:  Nucleic Acids Res       Date:  2015-05-20       Impact factor: 16.971

9.  Phage phi29 proteins p1 and p17 are required for efficient binding of architectural protein p6 to viral DNA in vivo.

Authors:  Víctor González-Huici; Martín Alcorlo; Margarita Salas; José M Hermoso
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

10.  Binding of phage Phi29 architectural protein p6 to the viral genome: evidence for topological restriction of the phage linear DNA.

Authors:  Víctor González-Huici; Martín Alcorlo; Margarita Salas; José M Hermoso
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

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