Literature DB >> 10600747

Crystal structure of Thermotoga maritima ribosome recycling factor: a tRNA mimic.

M Selmer1, S Al-Karadaghi, G Hirokawa, A Kaji, A Liljas.   

Abstract

Ribosome recycling factor (RRF), together with elongation factor G (EF-G), catalyzes recycling of ribosomes after one round of protein synthesis. The crystal structure of RRF was determined at 2.55 angstrom resolution. The protein has an unusual fold where domain I is a long three-helix bundle and domain II is a three-layer beta/alpha/beta sandwich. The molecule superimposes almost perfectly with a transfer RNA (tRNA) except that the amino acid-binding 3' end is missing. The mimicry suggests that RRF interacts with the posttermination ribosomal complex in a similar manner to a tRNA, leading to disassembly of the complex. The structural arrangement of this mimicry is entirely different from that of other cases of less pronounced mimicry of tRNA so far described.

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Year:  1999        PMID: 10600747     DOI: 10.1126/science.286.5448.2349

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  47 in total

Review 1.  Macromolecular mimicry.

Authors:  P Nissen; M Kjeldgaard; J Nyborg
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

2.  A model for the abrogation of the SOS response by an SOS protein: a negatively charged helix in DinI mimics DNA in its interaction with RecA.

Authors:  O N Voloshin; B E Ramirez; A Bax; R D Camerini-Otero
Journal:  Genes Dev       Date:  2001-02-15       Impact factor: 11.361

3.  Functional mapping of ribosome-contact sites in the ribosome recycling factor: a structural view from a tRNA mimic.

Authors:  T Fujiwara; K Ito; Y Nakamura
Journal:  RNA       Date:  2001-01       Impact factor: 4.942

4.  Suppression of eukaryotic translation termination by selected RNAs.

Authors:  J Carnes; L Frolova; S Zinnen; G Drugeon; M Phillippe; J Justesen; A L Haenni; L Leinwand; L L Kisselev; M Yarus
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

5.  Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch.

Authors:  T Toyoda; O F Tin; K Ito; T Fujiwara; T Kumasaka; M Yamamoto; M B Garber; Y Nakamura
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

6.  Role of ribosome recycling factor (RRF) in translational coupling.

Authors:  Y Inokuchi; A Hirashima; Y Sekine; L Janosi; A Kaji
Journal:  EMBO J       Date:  2000-07-17       Impact factor: 11.598

7.  Backbone NMR assignments of ribosome recycling factors (RRFs) from Escherichia coli and Tthermotoga maritima.

Authors:  Takuya Yoshida; Hiroyuki Kijima; Shinichiro Oka; Susumu Uchiyama; Hiroaki Nakano; Tadayasu Ohkubo; Yuji Kobayashi
Journal:  J Biomol NMR       Date:  2002-02       Impact factor: 2.835

8.  Terminating eukaryote translation: domain 1 of release factor eRF1 functions in stop codon recognition.

Authors:  G Bertram; H A Bell; D W Ritchie; G Fullerton; I Stansfield
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

9.  Physical and functional interaction between the eukaryotic orthologs of prokaryotic translation initiation factors IF1 and IF2.

Authors:  S K Choi; D S Olsen; A Roll-Mecak; A Martung; K L Remo; S K Burley; A G Hinnebusch; T E Dever
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272

10.  Inhibitory effect of heterologous ribosome recycling factor on growth of Escherichia coli.

Authors:  K Atarashi; A Kaji
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

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