Literature DB >> 10600731

Sequence-specific DNA recognition by polyamides.

P B Dervan1, R W Bürli.   

Abstract

Sequence-specific DNA-binding small molecules that can permeate cells could potentially regulate transcription of specific genes. Simple pairing rules for the minor groove of the double helix have been developed that allow the design of ligands for predetermined DNA sequences. Some of these polyamides have been shown to inhibit specific gene expression in mammalian cell culture.

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Year:  1999        PMID: 10600731     DOI: 10.1016/s1367-5931(99)00027-7

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  72 in total

Review 1.  Chemical genetics: ligand-based discovery of gene function.

Authors:  B R Stockwell
Journal:  Nat Rev Genet       Date:  2000-11       Impact factor: 53.242

Review 2.  Chemical approaches to control gene expression.

Authors:  J M Gottesfeld; J M Turner; P B Dervan
Journal:  Gene Expr       Date:  2000

3.  Antiherpetic activity of dimeric derivatives of netropsin.

Authors:  V L Andronova; S L Grokhovskii; A N Surovaya; G V Gurskii; G A Galegov
Journal:  Dokl Biochem Biophys       Date:  2001 Sep-Oct       Impact factor: 0.788

4.  Common and distinctive features of GNRA tetraloops based on a GUAA tetraloop structure at 1.4 A resolution.

Authors:  Carl C Correll; Kerren Swinger
Journal:  RNA       Date:  2003-03       Impact factor: 4.942

5.  Sequence-specific minor groove binding by bis-benzimidazoles: water molecules in ligand recognition.

Authors:  Christian Bailly; Gianni Chessari; Carolina Carrasco; Alexandra Joubert; John Mann; W David Wilson; Stephen Neidle
Journal:  Nucleic Acids Res       Date:  2003-03-01       Impact factor: 16.971

6.  Nucleic acid-triggered catalytic drug release.

Authors:  Z Ma; J S Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

7.  Structural perturbations in DNA caused by bis-intercalation of ditercalinium visualised by atomic force microscopy.

Authors:  Torunn Berge; Nigel S Jenkins; Richard B Hopkirk; Michael J Waring; J Michael Edwardson; Robert M Henderson
Journal:  Nucleic Acids Res       Date:  2002-07-01       Impact factor: 16.971

8.  A novel assay to determine the sequence preference and affinity of DNA minor groove binding compounds.

Authors:  Rita Thomas; Carolyn Gonzalez; Christopher Roberts; Janos Botyanszki; Lillian Lou; Emil F Michelotti
Journal:  Nucleic Acids Res       Date:  2004-01-12       Impact factor: 16.971

9.  Pseudocomplementary PNAs as selective modifiers of protein activity on duplex DNA: the case of type IIs restriction enzymes.

Authors:  Ekaterina Protozanova; Vadim V Demidov; Peter E Nielsen; Maxim D Frank-Kamenetskii
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

10.  Binding studies of a large antiviral polyamide to a natural HPV sequence.

Authors:  Gaofei He; Elena Vasilieva; George Davis Harris; Kevin J Koeller; James K Bashkin; Cynthia M Dupureur
Journal:  Biochimie       Date:  2014-02-26       Impact factor: 4.079

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