Literature DB >> 10597640

Evolutionary preservation of redundant duplicated genes.

D C Krakauer1, M A Nowak.   

Abstract

Gene duplication events produce both perfect and imperfect copies of genes. Perfect copies are said to be functionally redundant when knockout of one gene produces no 'scoreable', phenotypic effects. Preserving identical, duplicate copies of genes is problematic as all copies are prone to accumulate neutral mutations as pseudogenes, or more rarely, evolve into new genes with novel functions. We summarise theoretical treatments for the invasion and subsequent evolutionary modification of functionally redundant genes. We then consider the preservation of functionally identical copies of a gene over evolutionary time. We present several models for conserving redundancy: asymmetric mutation, asymmetric efficacy, pleiotropy, developmental buffering, allelic competition and regulatory asymmetries. In all cases, some form of symmetry breaking is required to maintain functional redundancy indefinitely.

Mesh:

Year:  1999        PMID: 10597640     DOI: 10.1006/scdb.1999.0337

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.727


  32 in total

1.  The probability of preservation of a newly arisen gene duplicate.

Authors:  M Lynch; M O'Hely; B Walsh; A Force
Journal:  Genetics       Date:  2001-12       Impact factor: 4.562

2.  Redundancy, antiredundancy, and the robustness of genomes.

Authors:  David C Krakauer; Joshua B Plotkin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

3.  The conservation of redundancy in genetic systems: effects of sexual and asexual reproduction.

Authors:  J A Morris; R D Morris
Journal:  J Biosci       Date:  2003-12       Impact factor: 1.826

4.  Asymmetric sequence divergence of duplicate genes.

Authors:  Gavin C Conant; Andreas Wagner
Journal:  Genome Res       Date:  2003-09       Impact factor: 9.043

5.  Gene conversion and functional divergence in the beta-globin gene family.

Authors:  Gabriela Aguileta; Joseph P Bielawski; Ziheng Yang
Journal:  J Mol Evol       Date:  2004-08       Impact factor: 2.395

6.  Robustness mechanisms in primate societies: a perturbation study.

Authors:  Jessica C Flack; David C Krakauer; Frans B M de Waal
Journal:  Proc Biol Sci       Date:  2005-06-07       Impact factor: 5.349

7.  A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors.

Authors:  Hildur V Colot; Gyungsoon Park; Gloria E Turner; Carol Ringelberg; Christopher M Crew; Liubov Litvinkova; Richard L Weiss; Katherine A Borkovich; Jay C Dunlap
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

8.  Reducing the fitness cost of antibiotic resistance by amplification of initiator tRNA genes.

Authors:  Annika I Nilsson; Anna Zorzet; Anna Kanth; Sabina Dahlström; Otto G Berg; Dan I Andersson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-24       Impact factor: 11.205

9.  Robustness and complexity co-constructed in multimodal signalling networks.

Authors:  Nihat Ay; Jessica Flack; David C Krakauer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2007-03-29       Impact factor: 6.237

Review 10.  More genes in vertebrates?

Authors:  Peter W H Holland
Journal:  J Struct Funct Genomics       Date:  2003
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