Literature DB >> 10592252

ASDB: database of alternatively spliced genes.

I Dralyuk1, M Brudno, M S Gelfand, M Zorn, I Dubchak.   

Abstract

Version 2.1 of ASDB (Alternative Splicing Data Base) contains 1922 protein and 2486 DNA sequences. The protein entries from SWISS-PROT are joined into clusters corresponding to alternatively spliced variants of one gene. The DNA division consists of complete genes with alternative splicing mentioned or annotated in GenBank. The search engine allows one to search over SWISS-PROT and GenBank fields and then follow the links to all variants. The database can be assessed at the URL http://cbcg.nersc.gov/asdb

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Year:  2000        PMID： 10592252      PMCID： PMC102426          DOI： 10.1093/nar/28.1.296

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  2 in total

1.  ASDB: database of alternatively spliced genes.

Authors:  M S Gelfand; I Dubchak; I Dralyuk; M Zorn
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

2.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971
  2 in total
  19 in total

1.  PALS db: Putative Alternative Splicing database.

Authors:  Y-H Huang; Y-T Chen; J-J Lai; S-T Yang; U-C Yang
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  ASD: the Alternative Splicing Database.

Authors:  T A Thanaraj; Stefan Stamm; Francis Clark; Jean-Jack Riethoven; Vincent Le Texier; Juha Muilu
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

3.  Genome-wide detection of tissue-specific alternative splicing in the human transcriptome.

Authors:  Qiang Xu; Barmak Modrek; Christopher Lee
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

4.  MAASE: an alternative splicing database designed for supporting splicing microarray applications.

Authors:  Christina L Zheng; Young-Soo Kwon; Hai-Ri Li; Kui Zhang; Gabriela Coutinho-Mansfield; Canzhu Yang; T Murlidharan Nair; Michael Gribskov; Xiang-Dong Fu
Journal:  RNA       Date:  2005-10-26       Impact factor: 4.942

5.  Molecular diversity of rat brain proteins as revealed by proteomic analysis.

Authors:  Jae-Won Yang; Jean-François Juranville; Harald Höger; Michael Fountoulakis; Gert Lubec
Journal:  Mol Divers       Date:  2005       Impact factor: 2.943

6.  AsMamDB: an alternative splice database of mammals.

Authors:  H Ji; Q Zhou; F Wen; H Xia; X Lu; Y Li
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

7.  Inferring alternative splicing patterns in mouse from a full-length cDNA library and microarray data.

Authors:  Hiromi Kochiwa; Ryosuke Suzuki; Takanori Washio; Rintaro Saito; Hidemasa Bono; Piero Carninci; Yasushi Okazaki; Rika Miki; Yoshihide Hayashizaki; Masaru Tomita
Journal:  Genome Res       Date:  2002-08       Impact factor: 9.043

8.  A study of alternative splicing in the pig.

Authors:  Ann-Britt Nygard; Susanna Cirera; Michael J Gilchrist; Jan Gorodkin; Claus B Jørgensen; Merete Fredholm
Journal:  BMC Res Notes       Date:  2010-05-05

9.  Alternative splicing and promoter use in TFII-I genes.

Authors:  Aleksandr V Makeyev; Dashzeveg Bayarsaihan
Journal:  Gene       Date:  2008-12-09       Impact factor: 3.688

10.  SpliceDisease database: linking RNA splicing and disease.

Authors:  Juan Wang; Jie Zhang; Kaibo Li; Wei Zhao; Qinghua Cui
Journal:  Nucleic Acids Res       Date:  2011-12-01       Impact factor: 16.971
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