Literature DB >> 10592202

MAGEST: MAboya gene expression patterns and sequence tags.

T Kawashima1, S Kawashima, M Kanehisa, H Nishida, K W Makabe.   

Abstract

MAGEST is a database for newly identified maternal cDNAs of the ascidian, Halocynthia roretzi, which aims to examine the population of the mRNAs. We have collected 3' and 5' tag sequences of mRNAs and their expression data from whole-mount in situ hybridi-zation in early embryos. To date, we have determined more than 2000 tag-sequences of H.roretzi cDNAs and input them into public databases. The tag sequences and the expression data as well as additional information can be obtained through MAGEST via the WWW at http://www.genome.ad.jp/magest/

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Year:  2000        PMID: 10592202      PMCID: PMC102485          DOI: 10.1093/nar/28.1.133

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  7 in total

1.  Maternally localized RNA encoding a serine/threonine protein kinase in the ascidian, Halocynthia roretzi.

Authors:  Y Sasakura; M Ogasawara; K W Makabe
Journal:  Mech Dev       Date:  1998-08       Impact factor: 1.882

2.  The PIR-International Protein Sequence Database.

Authors:  W C Barker; J S Garavelli; P B McGarvey; C R Marzec; B C Orcutt; G Y Srinivasarao; L S Yeh; R S Ledley; H W Mewes; F Pfeiffer; A Tsugita; C Wu
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

3.  KEGG: Kyoto Encyclopedia of Genes and Genomes.

Authors:  H Ogata; S Goto; K Sato; W Fujibuchi; H Bono; M Kanehisa
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

4.  HrWnt-5: a maternally expressed ascidian Wnt gene with posterior localization in early embryos.

Authors:  Y Sasakura; M Ogasawara; K W Makabe
Journal:  Int J Dev Biol       Date:  1998-05       Impact factor: 2.203

Review 5.  Cell fate specification by localized cytoplasmic determinants and cell interactions in ascidian embryos.

Authors:  H Nishida
Journal:  Int Rev Cytol       Date:  1997

6.  Cell lineage analysis in ascidian embryos by intracellular injection of a tracer enzyme. III. Up to the tissue restricted stage.

Authors:  H Nishida
Journal:  Dev Biol       Date:  1987-06       Impact factor: 3.582

7.  A maternal RNA encoding smad1/5 is segregated to animal blastomeres during ascidian development.

Authors:  A Kobayashi; Y Sasakura; M Ogasawara; K W Makabe
Journal:  Dev Growth Differ       Date:  1999-08       Impact factor: 2.053

  7 in total
  6 in total

1.  Update of MAGEST: Maboya Gene Expression patterns and Sequence Tags.

Authors:  Takeshi Kawashima; Shuichi Kawashima; Yuji Kohara; Minoru Kanehisa; Kazuhiro W Makabe
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  Ets-mediated brain induction in embryos of the ascidian Halocynthia roretzi.

Authors:  Takashi Akanuma; Hiroki Nishida
Journal:  Dev Genes Evol       Date:  2003-11-15       Impact factor: 0.900

3.  The functional analysis of Type I postplasmic/PEM mRNAs in embryos of the ascidian Halocynthia roretzi.

Authors:  Yoriko Nakamura; Kazuhiro W Makabe; Hiroki Nishida
Journal:  Dev Genes Evol       Date:  2005-12-21       Impact factor: 0.900

4.  Conservation of peripheral nervous system formation mechanisms in divergent ascidian embryos.

Authors:  Joshua F Coulcher; Agnès Roure; Rafath Chowdhury; Méryl Robert; Laury Lescat; Aurélie Bouin; Juliana Carvajal Cadavid; Hiroki Nishida; Sébastien Darras
Journal:  Elife       Date:  2020-11-16       Impact factor: 8.140

Review 5.  Museum of spatial transcriptomics.

Authors:  Lambda Moses; Lior Pachter
Journal:  Nat Methods       Date:  2022-03-10       Impact factor: 28.547

6.  Expression of Hr-Erf Gene during Ascidian Embryogenesis.

Authors:  Jung Eun Kim; Won Young Lee; Gil Jung Kim
Journal:  Dev Reprod       Date:  2013-12
  6 in total

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