Literature DB >> 10567233

Functional and conformational characterization of new mutants of heart fatty acid-binding protein.

A W Zimmerman1, M Rademacher, H Rüterjans, C Lücke, J H Veerkamp.   

Abstract

In this study we investigated the possible involvement of several amino acids (not located in the ligand-binding centre) in fatty acid binding and conformational stability of heart fatty acid-binding protein (H-FABP). We prepared recombinant human H-FABP proteins with mutations in the hydrophobic patch (Phe(4), Trp(8) and Phe(64)), portal region (Phe(16)), hinge region (Leu(66), Gly(67)), second portal region (Glu(72)) and at the protein surface (Lys(21)) respectively. Oleic acid-binding affinity and conformational stability of human H-FABP are significantly decreased or completely lost by mutation of Trp(8) or Phe(16). NMR spectra confirmed that these residues are important for the stability of the protein fold. Substitution of Phe(4) or Phe(64) resulted in less stability, but oleic acid-binding affinity was not affected. Mutation of Lys(21) had no effect on either structural integrity or fatty acid-binding affinity. Replacement of Leu(66) or Gly(67) did not affect fatty acid binding, but protein stability was reduced. Finally, mutation of Glu(72) to Ser caused no change of affinity, but NMR spectra and urea-denaturation curves showed the extremely poor stability of this mutant. In conclusion, no relationship was observed between fatty acid-binding affinity and conformational stability.

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Year:  1999        PMID: 10567233      PMCID: PMC1220668     

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  30 in total

1.  Turn scanning by site-directed mutagenesis: application to the protein folding problem using the intestinal fatty acid binding protein.

Authors:  K Kim; C Frieden
Journal:  Protein Sci       Date:  1998-08       Impact factor: 6.725

2.  Cloning of the cDNA encoding human skeletal-muscle fatty-acid-binding protein, its peptide sequence and chromosomal localization.

Authors:  R A Peeters; J H Veerkamp; A Geurts van Kessel; T Kanda; T Ono
Journal:  Biochem J       Date:  1991-05-15       Impact factor: 3.857

3.  Mutants of rat intestinal fatty acid-binding protein illustrate the critical role played by enthalpy-entropy compensation in ligand binding.

Authors:  G V Richieri; P J Low; R T Ogata; A M Kleinfeld
Journal:  J Biol Chem       Date:  1997-07-04       Impact factor: 5.157

4.  Protein measurement with the Folin phenol reagent.

Authors:  O H LOWRY; N J ROSEBROUGH; A L FARR; R J RANDALL
Journal:  J Biol Chem       Date:  1951-11       Impact factor: 5.157

5.  Rapid and efficient site-specific mutagenesis without phenotypic selection.

Authors:  T A Kunkel; J D Roberts; R A Zakour
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

6.  Binding kinetics of engineered mutants provide insight about the pathway for entering and exiting the intestinal fatty acid binding protein.

Authors:  G V Richieri; P J Low; R T Ogata; A M Kleinfeld
Journal:  Biochemistry       Date:  1999-05-04       Impact factor: 3.162

7.  Thermodynamics of fatty acid binding to engineered mutants of the adipocyte and intestinal fatty acid-binding proteins.

Authors:  G V Richieri; P J Low; R T Ogata; A M Kleinfeld
Journal:  J Biol Chem       Date:  1998-03-27       Impact factor: 5.157

8.  Temperature-induced conformational transition of intestinal fatty acid binding protein enhancing ligand binding: a functional, spectroscopic, and molecular modeling study.

Authors:  C N Arighi; J P Rossi; J M Delfino
Journal:  Biochemistry       Date:  1998-11-24       Impact factor: 3.162

9.  A radiochemical procedure for the assay of fatty acid binding by proteins.

Authors:  J F Glatz; J H Veerkamp
Journal:  Anal Biochem       Date:  1983-07-01       Impact factor: 3.365

10.  Expression in Escherichia coli and characterization of the fatty-acid-binding protein from human muscle.

Authors:  R A Peeters; J M Ena; J H Veerkamp
Journal:  Biochem J       Date:  1991-09-01       Impact factor: 3.857

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  9 in total

1.  FABP3 protein promotes α-synuclein oligomerization associated with 1-methyl-1,2,3,6-tetrahydropiridine-induced neurotoxicity.

Authors:  Norifumi Shioda; Yasushi Yabuki; Yuka Kobayashi; Misaki Onozato; Yuji Owada; Kohji Fukunaga
Journal:  J Biol Chem       Date:  2014-05-22       Impact factor: 5.157

2.  Solution structure of fatty acid-binding protein from human brain.

Authors:  Martin Rademacher; Aukje W Zimmerman; Heinz Rüterjans; Jacques H Veerkamp; Christian Lücke
Journal:  Mol Cell Biochem       Date:  2002-10       Impact factor: 3.396

3.  Sj-FABPc fatty-acid-binding protein of the human blood fluke Schistosoma japonicum: structural and functional characterization and unusual solvent exposure of a portal-proximal tryptophan residue.

Authors:  M W Kennedy; J C Scott; S Lo; J Beauchamp; D P McManus
Journal:  Biochem J       Date:  2000-07-01       Impact factor: 3.857

4.  New insights into intracellular lipid binding proteins: The role of buried water.

Authors:  Christian Lücke; Sinian Huang; Martin Rademacher; Heinz Rüterjans
Journal:  Protein Sci       Date:  2002-10       Impact factor: 6.725

5.  Insight into the interaction sites between fatty acid binding proteins and their ligands.

Authors:  Lihie Ben-Avraham Levin; Assaf Ganoth; Shay Amram; Esther Nachliel; Menachem Gutman; Yossi Tsfadia
Journal:  J Mol Model       Date:  2009-10-16       Impact factor: 1.810

6.  Fatty Acid Binding Proteins Expressed at the Human Blood-Brain Barrier Bind Drugs in an Isoform-Specific Manner.

Authors:  Gordon S Lee; Katharina Kappler; Christopher J H Porter; Martin J Scanlon; Joseph A Nicolazzo
Journal:  Pharm Res       Date:  2015-08-07       Impact factor: 4.200

7.  Structure and dynamics of a human myelin protein P2 portal region mutant indicate opening of the β barrel in fatty acid binding proteins.

Authors:  Saara Laulumaa; Tuomo Nieminen; Arne Raasakka; Oda C Krokengen; Anushik Safaryan; Erik I Hallin; Guillaume Brysbaert; Marc F Lensink; Salla Ruskamo; Ilpo Vattulainen; Petri Kursula
Journal:  BMC Struct Biol       Date:  2018-06-25

8.  An α-synuclein decoy peptide prevents cytotoxic α-synuclein aggregation caused by fatty acid binding protein 3.

Authors:  Naoya Fukui; Hanae Yamamoto; Moe Miyabe; Yuki Aoyama; Kunihiro Hongo; Tomohiro Mizobata; Ichiro Kawahata; Yasushi Yabuki; Yasuharu Shinoda; Kohji Fukunaga; Yasushi Kawata
Journal:  J Biol Chem       Date:  2021-04-13       Impact factor: 5.157

9.  Probing the interaction of brain fatty acid binding protein (B-FABP) with model membranes.

Authors:  Fábio Dyszy; Andressa P A Pinto; Ana P U Araújo; Antonio J Costa-Filho
Journal:  PLoS One       Date:  2013-03-28       Impact factor: 3.240

  9 in total

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