Literature DB >> 10555585

Heme methyl 1H chemical shifts as structural parameters in some low-spin ferriheme proteins.

I Bertini1, C Luchinat, G Parigi, F A Walker.   

Abstract

The different paramagnetic shifts of the four methyl groups in ferriheme proteins have been described as being due to the effect of the axial ligand nodal plane orientation. An equation, heuristically found and theoretically explained, describing the relation between contact and pseudocontact shifts and the position of the axial ligand(s) has been derived for bis-histidine ferriheme proteins and for cyanide-histidine ferriheme proteins. The values of the heuristic parameters contained in the equations were found by fitting the shifts of bovine cytochrome b5 and several bis-histidine cytochromes c3 and histidine-cyanide systems. The agreement between the observed and the calculated shifts was found to be good. Therefore, by taking advantage of this study, information on the position of the axial ligands, that can be used as a constraint for structure determination, can be obtained from the shifts of the methyl protons.

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Year:  1999        PMID: 10555585     DOI: 10.1007/s007750050337

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  27 in total

1.  Paramagnetism-based versus classical constraints: an analysis of the solution structure of Ca Ln calbindin D9k.

Authors:  I Bertini; A Donaire; B Jiménez; C Luchinat; G Parigi; M Piccioli; L Poggi
Journal:  J Biomol NMR       Date:  2001-10       Impact factor: 2.835

2.  Engineering peroxidase activity in myoglobin: the haem cavity structure and peroxide activation in the T67R/S92D mutant and its derivative reconstituted with protohaemin-l-histidine.

Authors:  Raffaella Roncone; Enrico Monzani; Monica Murtas; Giuseppe Battaini; Andrea Pennati; Anna Maria Sanangelantoni; Simone Zuccotti; Martino Bolognesi; Luigi Casella
Journal:  Biochem J       Date:  2004-02-01       Impact factor: 3.857

3.  NMR-validated structural model for oxidized Rhodopseudomonas palustris cytochrome c(556).

Authors:  Ivano Bertini; Jasmin Faraone-Mennella; Harry B Gray; Claudio Luchinat; Giacomo Parigi; Jay R Winkler
Journal:  J Biol Inorg Chem       Date:  2004-01-20       Impact factor: 3.358

4.  Effects of axial methionine coordination on the in-plane asymmetry of the heme electronic structure of cytochrome c.

Authors:  Naoki Tachiiri; Hikaru Hemmi; Shin-Ichi Joseph Takayama; Hajime Mita; Jun Hasegawa; Yoshihiro Sambongi; Yasuhiko Yamamoto
Journal:  J Biol Inorg Chem       Date:  2004-07-03       Impact factor: 3.358

5.  Role of the iron axial ligands of heme carrier HasA in heme uptake and release.

Authors:  Célia Caillet-Saguy; Mario Piccioli; Paola Turano; Gudrun Lukat-Rodgers; Nicolas Wolff; Kenton R Rodgers; Nadia Izadi-Pruneyre; Muriel Delepierre; Anne Lecroisey
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

6.  Replacement of the Distal Histidine Reveals a Noncanonical Heme Binding Site in a 2-on-2 Hemoglobin.

Authors:  Dillon B Nye; Juliette T J Lecomte
Journal:  Biochemistry       Date:  2018-09-28       Impact factor: 3.162

Review 7.  The heme environment of mouse neuroglobin: histidine imidazole plane orientations obtained from solution NMR and EPR spectroscopy as compared with X-ray crystallography.

Authors:  F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2006-04-04       Impact factor: 3.358

8.  Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: stability, structure, and dynamics of axial ligand complexes.

Authors:  Tatjana Kh Shokhireva; Robert E Berry; Elizabeth Uno; Celia A Balfour; Hongjun Zhang; F Ann Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-17       Impact factor: 11.205

9.  NMR investigations of nitrophorin 2 belt side chain effects on heme orientation and seating of native N-terminus NP2 and NP2(D1A).

Authors:  Robert E Berry; Dhanasekaran Muthu; Tatiana K Shokhireva; Sarah A Garrett; Allena M Goren; Hongjun Zhang; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2013-11-30       Impact factor: 3.358

10.  Hyperfine-shifted (13)C and (15)N NMR signals from Clostridium pasteurianum rubredoxin: extensive assignments and quantum chemical verification.

Authors:  I-Jin Lin; Bin Xia; David S King; Timothy E Machonkin; William M Westler; John L Markley
Journal:  J Am Chem Soc       Date:  2009-10-28       Impact factor: 15.419

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