Literature DB >> 10546891

SR-related proteins and the processing of messenger RNA precursors.

B J Blencowe1, J A Bowman, S McCracken, E Rosonina.   

Abstract

The processing of messenger RNA precursors (pre-mRNA) to mRNA in metazoans requires a large number of proteins that contain domains rich in alternating arginine and serine residues (RS domains). These include members of the SR family of splicing factors and proteins that are structurally and functionally distinct from the SR family, collectively referred to below as SR-related proteins. Both groups of RS domain proteins function in constitutive and regulated pre-mRNA splicing. Recently, several SR-related proteins have been identified that are associated with the transcriptional machinery. Other SR-related proteins are associated with mRNA 3' end formation and have been implicated in export. We review these findings and evidence that proteins containing RS domains may play a fundamental role in coordinating different steps in the synthesis and processing of pre-mRNA.

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Year:  1999        PMID: 10546891

Source DB:  PubMed          Journal:  Biochem Cell Biol        ISSN: 0829-8211            Impact factor:   3.626


  46 in total

1.  SRm160 splicing coactivator promotes transcript 3'-end cleavage.

Authors:  Susan McCracken; Mark Lambermon; Benjamin J Blencowe
Journal:  Mol Cell Biol       Date:  2002-01       Impact factor: 4.272

2.  The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes.

Authors:  O V Makarova; E M Makarov; R Lührmann
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

Review 3.  Sorting out the complexity of SR protein functions.

Authors:  B R Graveley
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

4.  Eukaryote-specific domains in translation initiation factors: implications for translation regulation and evolution of the translation system.

Authors:  L Aravind; E V Koonin
Journal:  Genome Res       Date:  2000-08       Impact factor: 9.043

5.  Mutations in tau gene exon 10 associated with FTDP-17 alter the activity of an exonic splicing enhancer to interact with Tra2 beta.

Authors:  Zhihong Jiang; Hao Tang; Necat Havlioglu; Xiaochun Zhang; Stefan Stamm; Riqiang Yan; Jane Y Wu
Journal:  J Biol Chem       Date:  2003-03-20       Impact factor: 5.157

6.  A novel function for Sam68: enhancement of HIV-1 RNA 3' end processing.

Authors:  Meredith McLaren; Kengo Asai; Alan Cochrane
Journal:  RNA       Date:  2004-07       Impact factor: 4.942

7.  Algorithm to identify frequent coupled modules from two-layered network series: application to study transcription and splicing coupling.

Authors:  Wenyuan Li; Chao Dai; Chun-Chi Liu; Xianghong Jasmine Zhou
Journal:  J Comput Biol       Date:  2012-06       Impact factor: 1.479

Review 8.  The RNAissance family: SR proteins as multifaceted regulators of gene expression.

Authors:  Jonathan M Howard; Jeremy R Sanford
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-08-22       Impact factor: 9.957

9.  Systematic identification of factors involved in post-transcriptional processes in wheat grain.

Authors:  Sergiy Lopato; Ljudmilla Borisjuk; Andrew S Milligan; Neil Shirley; Natalia Bazanova; Kate Parsley; Peter Langridge
Journal:  Plant Mol Biol       Date:  2006-08-29       Impact factor: 4.076

10.  Integrative analysis of many RNA-seq datasets to study alternative splicing.

Authors:  Wenyuan Li; Chao Dai; Shuli Kang; Xianghong Jasmine Zhou
Journal:  Methods       Date:  2014-02-28       Impact factor: 3.608

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