Literature DB >> 10545455

Quantitative trait loci affecting survival and fertility-related traits in Caenorhabditis elegans show genotype-environment interactions, pleiotropy and epistasis.

D R Shook1, T E Johnson.   

Abstract

We have identified, using composite interval mapping, quantitative trait loci (QTL) affecting a variety of life history traits (LHTs) in the nematode Caenorhabditis elegans. Using recombinant inbred strains assayed on the surface of agar plates, we found QTL for survival, early fertility, age of onset of sexual maturity, and population growth rate. There was no overall correlation between survival on solid media and previous measures of survival in liquid media. Of the four survival QTL found in these two environments, two have genotype-environment interactions (GEIs). Epistatic interactions between markers were detected for four traits. A multiple regression approach was used to determine which single markers and epistatic interactions best explained the phenotypic variance for each trait. The amount of phenotypic variance accounted for by genetic effects ranged from 13% (for internal hatching) to 46% (for population growth). Epistatic effects accounted for 9-11% of the phenotypic variance for three traits. Two regions containing QTL that affected more than one fertility-related trait were found. This study serves as an example of the power of QTL mapping for dissecting the genetic architecture of a suite of LHTs and indicates the potential importance of environment and GEIs in the evolution of this architecture.

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Year:  1999        PMID: 10545455      PMCID: PMC1460837     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  19 in total

1.  Sex-specific quantitative trait loci affecting longevity in Drosophila melanogaster.

Authors:  S V Nuzhdin; E G Pasyukova; C L Dilda; Z B Zeng; T F Mackay
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

2.  More is not better: brood size and population growth in a self-fertilizing nematode.

Authors:  J Hodgkin; T M Barnes
Journal:  Proc Biol Sci       Date:  1991-10-22       Impact factor: 5.349

3.  A simple regression method for mapping quantitative trait loci in line crosses using flanking markers.

Authors:  C S Haley; S A Knott
Journal:  Heredity (Edinb)       Date:  1992-10       Impact factor: 3.821

4.  Genotype-environment interactions and the maintenance of polygenic variation.

Authors:  J H Gillespie; M Turelli
Journal:  Genetics       Date:  1989-01       Impact factor: 4.562

Review 5.  Empirical estimates of Bonferroni corrections for use in chromosome mapping studies with the BXD recombinant inbred strains.

Authors:  J K Belknap
Journal:  Behav Genet       Date:  1992-11       Impact factor: 2.805

Review 6.  Genetic analysis of ageing: role of oxidative damage and environmental stresses.

Authors:  G M Martin; S N Austad; T E Johnson
Journal:  Nat Genet       Date:  1996-05       Impact factor: 38.330

7.  Mapping mendelian factors underlying quantitative traits using RFLP linkage maps.

Authors:  E S Lander; D Botstein
Journal:  Genetics       Date:  1989-01       Impact factor: 4.562

8.  High-frequency excision of transposable element Tc 1 in the nematode Caenorhabditis elegans is limited to somatic cells.

Authors:  S W Emmons; L Yesner
Journal:  Cell       Date:  1984-03       Impact factor: 41.582

9.  Genetics of life history in Drosophila melanogaster. II. Exploratory selection experiments.

Authors:  M R Rose; B Charlesworth
Journal:  Genetics       Date:  1981-01       Impact factor: 4.562

10.  Genetic analysis of life-span in Caenorhabditis elegans.

Authors:  T E Johnson; W B Wood
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

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  34 in total

1.  Enhanced efficiency of quantitative trait loci mapping analysis based on multivariate complexes of quantitative traits.

Authors:  A B Korol; Y I Ronin; A M Itskovich; J Peng; E Nevo
Journal:  Genetics       Date:  2001-04       Impact factor: 4.562

2.  Genetic loci modulating fitness and life span in Caenorhabditis elegans: categorical trait interval mapping in CL2a x Bergerac-BO recombinant-inbred worms.

Authors:  Srinivas Ayyadevara; Rajani Ayyadevara; Anthony Vertino; Andrzej Galecki; John J Thaden; Robert J Shmookler Reis
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562

3.  Pleiotropy of segregating genetic variants that affect honey bee worker life expectancy.

Authors:  Luke R Dixon; Michelle R McQuage; Ellen J Lonon; Dominique Buehler; Oumar Seck; Olav Rueppell
Journal:  Exp Gerontol       Date:  2012-06-01       Impact factor: 4.032

4.  Genetic variability at neutral markers, quantitative trait land trait in a subdivided population under selection.

Authors:  Valérie Le Corre; Antoine Kremer
Journal:  Genetics       Date:  2003-07       Impact factor: 4.562

5.  Heterogeneous selection at specific loci in natural environments in Arabidopsis thaliana.

Authors:  Cynthia Weinig; Lisa A Dorn; Nolan C Kane; Zachary M German; Solveig S Halldorsdottir; Mark C Ungerer; Yuko Toyonaga; Trudy F C Mackay; Michael D Purugganan; Johanna Schmitt
Journal:  Genetics       Date:  2003-09       Impact factor: 4.562

6.  Genotype-environment interactions at quantitative trait loci affecting inflorescence development in Arabidopsis thaliana.

Authors:  Mark C Ungerer; Solveig S Halldorsdottir; Michael D Purugganan; Trudy F C Mackay
Journal:  Genetics       Date:  2003-09       Impact factor: 4.562

7.  Polygenic variation maintained by balancing selection: pleiotropy, sex-dependent allelic effects and G x E interactions.

Authors:  Michael Turelli; N H Barton
Journal:  Genetics       Date:  2004-02       Impact factor: 4.562

8.  Quantitative trait loci with age-specific effects on fecundity in Drosophila melanogaster.

Authors:  Jeff Leips; Paul Gilligan; Trudy F C Mackay
Journal:  Genetics       Date:  2005-11-04       Impact factor: 4.562

9.  Spontaneous mutational correlations for life-history, morphological and behavioral characters in Caenorhabditis elegans.

Authors:  Suzanne Estes; Beverly C Ajie; Michael Lynch; Patrick C Phillips
Journal:  Genetics       Date:  2005-04-16       Impact factor: 4.562

10.  Genetic interactions between polymorphisms that affect gene expression in yeast.

Authors:  Rachel B Brem; John D Storey; Jacqueline Whittle; Leonid Kruglyak
Journal:  Nature       Date:  2005-08-04       Impact factor: 49.962

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