Literature DB >> 10545322

The second type II module from human matrix metalloproteinase 2: structure, function and dynamics.

K Briknarová1, A Grishaev, L Bányai, H Tordai, L Patthy, M Llinás.   

Abstract

BACKGROUND: Matrix metalloproteinase 2 (MMP-2, gelatinase A, 72 kDa type IV collagenase) has an important role in extracellular matrix degradation during cell migration and tissue remodeling. It is involved in development, inflammation, wound healing, tumor invasion, metastasis and other physiological and pathological processes. The enzyme cleaves several types of collagen, elastin, fibronectin and laminin. Binding to collagen is mediated by three repeats homologous to fibronectin type II modules, which are inserted in the catalytic domain in proximity to the active site.
RESULTS: We have determined the NMR solution structure of the second type II module from human MMP-2 (col-2). The module exhibits a typical type II fold with two short double-stranded antiparallel beta sheets and three large loops packed around a cluster of conserved aromatic residues. Backbone amide dynamics, derived from (15)N relaxation experiments, correlate well with solvent accessibility and intramolecular hydrogen bonding. A synthetic peptide with the collagen consensus sequence, (Pro-Pro-Gly)(6), is shown to interact with the module.
CONCLUSIONS: Spectral perturbations induced by (Pro-Pro-Gly)(6) binding reveal the region involved in the interaction of col-2 with collagen. The binding surface comprises exposed aromatic residues Phe21, Tyr38, Trp40, Tyr47, Tyr53 and Phe55, and the neighboring Gly33-Gly37 segment.

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Year:  1999        PMID: 10545322     DOI: 10.1016/s0969-2126(00)80057-x

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  16 in total

1.  The hairpin structure of the (6)F1(1)F2(2)F2 fragment from human fibronectin enhances gelatin binding.

Authors:  A R Pickford; S P Smith; D Staunton; J Boyd; I D Campbell
Journal:  EMBO J       Date:  2001-04-02       Impact factor: 11.598

2.  Origin of fibronectin type II (FN2) modules: structural analyses of distantly-related members of the kringle family idey the kringle domain of neurotrypsin as a potential link between FN2 domains and kringles.

Authors:  O A Ozhogina; M Trexler; L Bányai; M Llinás; L Patthy
Journal:  Protein Sci       Date:  2001-10       Impact factor: 6.725

3.  CLOUDS, a protocol for deriving a molecular proton density via NMR.

Authors:  Alexander Grishaev; Miguel Llinás
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-14       Impact factor: 11.205

4.  BACUS: A Bayesian protocol for the identification of protein NOESY spectra via unassigned spin systems.

Authors:  Alexander Grishaev; Miguel Llinás
Journal:  J Biomol NMR       Date:  2004-01       Impact factor: 2.835

5.  Collagen binding by the mannose receptor mediated through the fibronectin type II domain.

Authors:  Catherine E Napper; Kurt Drickamer; Maureen E Taylor
Journal:  Biochem J       Date:  2006-05-01       Impact factor: 3.857

6.  Complex determinants in specific members of the mannose receptor family govern collagen endocytosis.

Authors:  Henrik J Jürgensen; Kristina Johansson; Daniel H Madsen; Astrid Porse; Maria C Melander; Kristine R Sørensen; Christoffer Nielsen; Thomas H Bugge; Niels Behrendt; Lars H Engelholm
Journal:  J Biol Chem       Date:  2014-02-05       Impact factor: 5.157

7.  The collagen receptor uPARAP/Endo180 regulates collectins through unique structural elements in its FNII domain.

Authors:  Kirstine Sandal Nørregaard; Oliver Krigslund; Niels Behrendt; Lars H Engelholm; Henrik Jessen Jürgensen
Journal:  J Biol Chem       Date:  2020-05-18       Impact factor: 5.157

8.  Comparison of Three Chain-of-States Methods: Nudged Elastic Band and Replica Path with Restraints or Constraints.

Authors:  Peng Tao; Milan Hodošček; Joseph D Larkin; Yihan Shao; Bernard R Brooks
Journal:  J Chem Theory Comput       Date:  2012-09-27       Impact factor: 6.006

9.  Nuclear magnetic resonance mapping and functional confirmation of the collagen binding sites of matrix metalloproteinase-2.

Authors:  Xiaoping Xu; Margarita Mikhailova; Udayar Ilangovan; Zhihua Chen; Agnes Yu; Sanjay Pal; Andrew P Hinck; Bjorn Steffensen
Journal:  Biochemistry       Date:  2009-06-30       Impact factor: 3.162

10.  Inhibition of MMP-2 gelatinolysis by targeting exodomain-substrate interactions.

Authors:  Xiaoping Xu; Zhihua Chen; Yao Wang; Lynda Bonewald; Bjorn Steffensen
Journal:  Biochem J       Date:  2007-08-15       Impact factor: 3.857

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