Literature DB >> 10542226

Substrate diversity of herpes simplex virus thymidine kinase. Impact Of the kinematics of the enzyme.

B D Pilger1, R Perozzo, F Alber, C Wurth, G Folkers, L Scapozza.   

Abstract

Herpes simplex virus type 1 (HSV 1) thymidine kinase (TK) exhibits an extensive substrate diversity for nucleobases and sugar moieties, in contrast to other TKs. This substrate diversity is the crucial molecular basis of selective antiviral and suicide gene therapy. The mechanisms of substrate binding of HSV 1 TK were studied by means of site-directed mutagenesis combined with isothermal calorimetric measurements and guided by theoretical calculations and sequence comparison. The results show the link between the exceptionally broad substrate diversity of HSV 1 TK and the presence of structural features such as the residue triad His-58/Met-128/Tyr-172. The mutation of Met-128 into a Phe and the double mutant M128F/Y172F result in mutants that have lost their activity. However, by exchanging His to form the triple mutant H58L/M128F/Y172F, the enzyme regains activity. Strikingly, this triple mutant becomes resistant toward acyclovir. Furthermore, we give evidence for the importance of Glu-225 of the flexible LID region for the catalytic reaction. The data presented give new insights to understand mechanisms ruling substrate diversity and thus are crucial for both the development of new antiviral drugs and engineering of mutant TKs apt to accept novel substrate analogs for gene therapeutic approaches.

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Year:  1999        PMID: 10542226     DOI: 10.1074/jbc.274.45.31967

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

1.  Characterization of herpes simplex virus type 1 thymidine kinase mutants selected under a single round of high-dose brivudin.

Authors:  Graciela Andrei; Jan Balzarini; Pierre Fiten; Erik De Clercq; Ghislain Opdenakker; Robert Snoeck
Journal:  J Virol       Date:  2005-05       Impact factor: 5.103

2.  Structures of thymidine kinase 1 of human and mycoplasmic origin.

Authors:  Martin Welin; Urszula Kosinska; Nils-Egil Mikkelsen; Cecilia Carnrot; Chunying Zhu; Liya Wang; Staffan Eriksson; Birgitte Munch-Petersen; Hans Eklund
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-20       Impact factor: 11.205

3.  The effect of substrate binding on the conformation and structural stability of Herpes simplex virus type 1 thymidine kinase.

Authors:  C Wurth; U Kessler; J Vogt; G E Schulz; G Folkers; L Scapozza
Journal:  Protein Sci       Date:  2001-01       Impact factor: 6.725

4.  Investigation of the nature of the methionine-pi interaction in beta-hairpin peptide model systems.

Authors:  Chad D Tatko; Marcey L Waters
Journal:  Protein Sci       Date:  2004-09       Impact factor: 6.725

5.  SiMMap: a web server for inferring site-moiety map to recognize interaction preferences between protein pockets and compound moieties.

Authors:  Yen-Fu Chen; Kai-Cheng Hsu; Shen-Rong Lin; Wen-Ching Wang; Yu-Chi Huang; Jinn-Moon Yang
Journal:  Nucleic Acids Res       Date:  2010-06-02       Impact factor: 16.971

Review 6.  A medicinal chemist's guide to molecular interactions.

Authors:  Caterina Bissantz; Bernd Kuhn; Martin Stahl
Journal:  J Med Chem       Date:  2010-07-22       Impact factor: 7.446

7.  Identification and characterization of the conserved nucleoside-binding sites in the Epstein-Barr virus thymidine kinase.

Authors:  Chung-Chun Wu; Min-Che Chen; Ya-Ru Chang; Tsuey-Ying Hsu; Jen-Yang Chen
Journal:  Biochem J       Date:  2004-05-01       Impact factor: 3.857

8.  iGEMDOCK: a graphical environment of enhancing GEMDOCK using pharmacological interactions and post-screening analysis.

Authors:  Kai-Cheng Hsu; Yen-Fu Chen; Shen-Rong Lin; Jinn-Moon Yang
Journal:  BMC Bioinformatics       Date:  2011-02-15       Impact factor: 3.169

9.  Structural and Kinetic Characterization of Thymidine Kinase from Leishmania major.

Authors:  Jennifer Timm; Cristina Bosch-Navarrete; Eliseo Recio; Joanne E Nettleship; Heather Rada; Dolores González-Pacanowska; Keith S Wilson
Journal:  PLoS Negl Trop Dis       Date:  2015-05-15

10.  Lethal mutagenesis of poliovirus mediated by a mutagenic pyrimidine analogue.

Authors:  Jason D Graci; Daniel A Harki; Victoria S Korneeva; Jocelyn P Edathil; Kathleen Too; David Franco; Eric D Smidansky; Aniko V Paul; Blake R Peterson; Daniel M Brown; David Loakes; Craig E Cameron
Journal:  J Virol       Date:  2007-08-08       Impact factor: 5.103

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