Literature DB >> 10512721

Chaperonin-affected refolding of alpha-lactalbumin: effects of nucleotides and the co-chaperonin GroES.

T Makio1, M Arai, K Kuwajima.   

Abstract

We have studied how nucleotides (ADP, AMP-PNP, and ATP) and the co-chaperonin GroES influence the GroEL-affected refolding of apo-alpha-lactalbumin. The refolding reactions induced by stopped-flow pH jumps were monitored by alpha-lactalbumin tryptophan fluorescence. The simple single-exponential character of the free-refolding kinetics of the protein allowed us to quantitatively analyze the kinetic traces of the GroEL-affected refolding with the aid of computer simulations, and to obtain the best-fit parameters for binding between GroEL and the refolding intermediate of alpha-lactalbumin by the non-linear least-squares method. When GroES was absent, the interaction between GroEL and alpha-lactalbumin could be well represented by a "cooperative-binding" model in which GroEL has two binding sites for alpha-lactalbumin with the affinity of the second site being tenfold weaker than that of the first, so that there is negative cooperativity between the two sites. The affinity between GroEL and alpha-lactalbumin was significantly reduced when ATP was present, while ADP and AMP-PNP did not alter the affinity. A comparison of this result with those reported previously for other target proteins suggests a remarkable adjustability of the GroEL 14-mer with respect to the nucleotide-induced reduction of affinity. When GroES was present, ATP as well as ADP and AMP-PNP were effective in reducing the affinity between GroEL and the refolding intermediate of alpha-lactalbumin. The affinity at a saturating concentration of ADP or AMP-PNP was about ten times lower than with GroEL alone. The ADP concentration at which the acceleration of the GroEL/ES-affected refolding of alphaLA was observed, was higher than the concentration at which the nucleotide-induced formation of the GroEL/ES complex took place. These results indicate that GroEL/ES complex formation itself is not enough to reduce the affinity for alpha-lactalbumin, and that further binding of the nucleotide to the GroEL/ES complex is required to reduce the affinity. Copyright 1999 Academic Press.

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Year:  1999        PMID: 10512721     DOI: 10.1006/jmbi.1999.3142

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  9 in total

1.  Folding with and without encapsulation by cis- and trans-only GroEL-GroES complexes.

Authors:  George W Farr; Wayne A Fenton; Tapan K Chaudhuri; Daniel K Clare; Helen R Saibil; Arthur L Horwich
Journal:  EMBO J       Date:  2003-07-01       Impact factor: 11.598

2.  Denaturation and reassembly of chaperonin GroEL studied by solution X-ray scattering.

Authors:  Munehito Arai; Tomonao Inobe; Kosuke Maki; Teikichi Ikura; Hiroshi Kihara; Yoshiyuki Amemiya; Kunihiro Kuwajima
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

3.  Asymmetry of the GroEL-GroES complex under physiological conditions as revealed by small-angle x-ray scattering.

Authors:  Tomonao Inobe; Kazunobu Takahashi; Kosuke Maki; Sawako Enoki; Kiyoto Kamagata; Akio Kadooka; Munehito Arai; Kunihiro Kuwajima
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

4.  Chaperonin-affected folding of globular proteins.

Authors:  K Kuwajima; T Makio; T Inobe
Journal:  J Biol Phys       Date:  2002-06       Impact factor: 1.365

5.  Covalent structural changes in unfolded GroES that lead to amyloid fibril formation detected by NMR: insight into intrinsically disordered proteins.

Authors:  Hisanori Iwasa; Shunsuke Meshitsuka; Kunihiro Hongo; Tomohiro Mizobata; Yasushi Kawata
Journal:  J Biol Chem       Date:  2011-04-20       Impact factor: 5.157

6.  Protocol for Spontaneous and Chaperonin-assisted in vitro Refolding of a Slow-folding Mutant of GFP, sGFP.

Authors:  Anwar Sadat; Satyam Tiwari; Koyeli Mapa
Journal:  Bio Protoc       Date:  2021-07-20

7.  Biomolecular robotics for chemomechanically driven guest delivery fuelled by intracellular ATP.

Authors:  Shuvendu Biswas; Kazushi Kinbara; Tatsuya Niwa; Hideki Taguchi; Noriyuki Ishii; Sumiyo Watanabe; Kanjiro Miyata; Kazunori Kataoka; Takuzo Aida
Journal:  Nat Chem       Date:  2013-06-02       Impact factor: 24.427

8.  Formation of the chaperonin complex studied by 2D NMR spectroscopy.

Authors:  Toshio Takenaka; Takashi Nakamura; Saeko Yanaka; Maho Yagi-Utsumi; Mahesh S Chandak; Kazunobu Takahashi; Subhankar Paul; Koki Makabe; Munehito Arai; Koichi Kato; Kunihiro Kuwajima
Journal:  PLoS One       Date:  2017-10-23       Impact factor: 3.240

9.  Novel cryo-EM structure of an ADP-bound GroEL-GroES complex.

Authors:  Sofia S Kudryavtseva; Evgeny B Pichkur; Igor A Yaroshevich; Aleksandra A Mamchur; Irina S Panina; Andrei V Moiseenko; Olga S Sokolova; Vladimir I Muronetz; Tatiana B Stanishneva-Konovalova
Journal:  Sci Rep       Date:  2021-09-14       Impact factor: 4.379

  9 in total

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