Literature DB >> 10508774

Methods for exploring early events in protein folding.

H Roder1, M R Shastry.   

Abstract

Progress in understanding dynamic aspects of protein folding relies on the continuing development of methods for obtaining more detailed structural information on the transient conformational ensembles that often appear within microseconds of initiating refolding. Advances in rapid mixing and other time-resolved spectroscopic methods have made it possible to explore some of the earliest stages of folding, including the initial formation of compact states, which is determined by the presence of a sequence-specific kinetic barrier, as well as the 'downhill' folding kinetics after the rate-limiting barrier has been crossed.

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Year:  1999        PMID: 10508774     DOI: 10.1016/s0959-440x(99)00015-9

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  11 in total

1.  Early formation of a beta hairpin during folding of staphylococcal nuclease H124L as detected by pulsed hydrogen exchange.

Authors:  William F Walkenhorst; Jason A Edwards; John L Markley; Heinrich Roder
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

2.  Lifetimes of intermediates in the beta -sheet to alpha -helix transition of beta -lactoglobulin by using a diffusional IR mixer.

Authors:  E Kauffmann; N C Darnton; R H Austin; C Batt; K Gerwert
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-22       Impact factor: 11.205

3.  Measurement of microsecond dynamic motion in the intestinal fatty acid binding protein by using fluorescence correlation spectroscopy.

Authors:  Krishnananda Chattopadhyay; Saveez Saffarian; Elliot L Elson; Carl Frieden
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-15       Impact factor: 11.205

4.  Laminar-flow fluid mixer for fast fluorescence kinetics studies.

Authors:  Suzette A Pabit; Stephen J Hagen
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

5.  How fast is protein hydrophobic collapse?

Authors:  Mourad Sadqi; Lisa J Lapidus; Victor Muñoz
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-06       Impact factor: 11.205

Review 6.  Early events in protein folding explored by rapid mixing methods.

Authors:  Heinrich Roder; Kosuke Maki; Hong Cheng
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

7.  Analysis of the kinetics of folding of proteins and peptides using circular dichroism.

Authors:  Norma J Greenfield
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

8.  Transient 2D IR spectroscopy of ubiquitin unfolding dynamics.

Authors:  Hoi Sung Chung; Ziad Ganim; Kevin C Jones; Andrei Tokmakoff
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-05       Impact factor: 11.205

9.  Refolding of Lysozyme in Glycerol as Studied by Fast Scanning Calorimetry.

Authors:  Alisa Fatkhutdinova; Timur Mukhametzyanov; Christoph Schick
Journal:  Int J Mol Sci       Date:  2022-03-02       Impact factor: 5.923

10.  Non-sequence-specific interactions can account for the compaction of proteins unfolded under "native" conditions.

Authors:  Jonathan E Kohn; Blake Gillespie; Kevin W Plaxco
Journal:  J Mol Biol       Date:  2009-09-12       Impact factor: 5.469

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