Literature DB >> 10456773

Structure determination and refinement of the Al3+ complex of the D254,256E mutant of Arthrobacter D-xylose isomerase at 2.40 A resolution. Further evidence for inhibitor-induced metal ion movement.

T Gérczei1, Z Böcskei, E Szabó, B Asbóth, G Náray-Szabó.   

Abstract

The structure of the D254.256E double mutant of Arthrobacter xylose isomerase with Al3+ at both metal-binding sites was determined by the molecular replacement method at a conventional R-factor of 0.179. Binding of the two Al3+ does not alter the overall structure significantly. However, there are local rearrangements in the octahedral co-ordination sphere of the Al3+. The inhibitor molecule moves somewhat away from the active site. Furthermore, evidence was revealed for metal ion movement from site 2(1) to site 2(2) upon double mutation. Xylose isomerase requires two divalent metal cations for activation. The catalytic metal ion is translocated 1.8 A away from its initial position during the catalytic reaction. The fact that both activating and inactivating metals (including Al3+) were found exclusively at a single location in the double mutant was an indication that the consequently missing shuttle may account for the crippled catalytic efficiency.

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Year:  1999        PMID: 10456773     DOI: 10.1016/s0141-8130(99)00051-3

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  4 in total

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Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-04-30

2.  Engineered glucose isomerase from Streptomyces sp. SK is resistant to Ca²⁺ inhibition and Co²⁺ independent.

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Journal:  J Ind Microbiol Biotechnol       Date:  2011-12-04       Impact factor: 3.346

Review 3.  Aluminium in biological environments: a computational approach.

Authors:  Jon I Mujika; Elixabete Rezabal; Jose M Mercero; Fernando Ruipérez; Dominique Costa; Jesus M Ugalde; Xabier Lopez
Journal:  Comput Struct Biotechnol J       Date:  2014-03-28       Impact factor: 7.271

4.  Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.

Authors:  Misun Lee; Henriëtte J Rozeboom; Paul P de Waal; Rene M de Jong; Hanna M Dudek; Dick B Janssen
Journal:  Biochemistry       Date:  2017-11-02       Impact factor: 3.162

  4 in total

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