Literature DB >> 10449454

Automated quantitative analysis of hepatitis B virus DNA by using the Cobas Amplicor HBV monitor test.

U Noborg1, A Gusdal, E K Pisa, A Hedrum, M Lindh.   

Abstract

A highly sensitive method of quantitative analysis of hepatitis B virus (HBV) DNA in serum, the Cobas Amplicor HBV Monitor (Cobas-AM) test, was evaluated. Following a manual extraction of viral DNA, amplification, colorimetric detection, and quantitative determination are all automatically performed in the Cobas analyzer. Serially diluted samples with known HBV DNA concentrations were analyzed blindly. All samples with a virus concentration of 400 copies/ml and 83% of samples with a virus concentration of 100 copies/ml could be detected. A linear correlation between input HBV DNA and measured HBV DNA was seen in the range from 100 to 10(5) copies/ml. The mean coefficient of variation was 29.6% for all input levels and 18.9% for HBV DNA concentrations above 400 copies/ml. Samples with an HBV DNA level above 10(9) copies/ml could be reproducibly measured after predilution to 10(-4) or 10(-6) in negative serum; however, the level was underestimated if target DNA after dilution was still above the linear range of the assay. Quantitative results of the Cobas-AM test were interchangeable with measurements by the manual microwell plate version of Amplicor HBV Monitor (MWP-AM); the mean ratio for log Cobas-AM results/log MWP-AM results was 0.97 (standard error of the mean, 0.007) when serum samples from 153 chronic carriers were analyzed. The test should be of value for clinical assessment of chronic carriers and for monitoring the response to antiviral treatment. A limitation is the relatively narrow linear range of the assay, requiring predilution of high-titer (mainly hepatitis B e-antigen-positive) samples.

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Year:  1999        PMID: 10449454      PMCID: PMC85382     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  14 in total

1.  COBAS AMPLICOR: fully automated RNA and DNA amplification and detection system for routine diagnostic PCR.

Authors:  N DiDomenico; H Link; R Knobel; T Caratsch; W Weschler; Z G Loewy; M Rosenstraus
Journal:  Clin Chem       Date:  1996-12       Impact factor: 8.327

2.  Low level hepatitis B viremia detected by polymerase chain reaction accompanies the absence of HBe antigenemia and hepatitis in hepatitis B virus carriers.

Authors:  H Niitsuma; M Ishii; M Miura; K Kobayashi; T Toyota
Journal:  Am J Gastroenterol       Date:  1997-01       Impact factor: 10.864

3.  Identification and characterization of mutations in hepatitis B virus resistant to lamivudine. Lamivudine Clinical Investigation Group.

Authors:  M I Allen; M Deslauriers; C W Andrews; G A Tipples; K A Walters; D L Tyrrell; N Brown; L D Condreay
Journal:  Hepatology       Date:  1998-06       Impact factor: 17.425

4.  Emergence and takeover of YMDD motif mutant hepatitis B virus during long-term lamivudine therapy and re-takeover by wild type after cessation of therapy.

Authors:  K Chayama; Y Suzuki; M Kobayashi; M Kobayashi; A Tsubota; M Hashimoto; Y Miyano; H Koike; M Kobayashi; I Koida; Y Arase; S Saitoh; N Murashima; K Ikeda; H Kumada
Journal:  Hepatology       Date:  1998-06       Impact factor: 17.425

Review 5.  Quantification of viral load: clinical relevance for human immunodeficiency virus, hepatitis B virus and hepatitis C virus infection.

Authors:  A Berger; J Braner; H W Doerr; B Weber
Journal:  Intervirology       Date:  1998       Impact factor: 1.763

6.  The value of quantitative detection of HBV-DNA amplified by PCR in the study of hepatitis B infection.

Authors:  R Jardi; M Buti; F Rodriguez-Frias; M Cortina; R Esteban; J Guardia; C Pascual
Journal:  J Hepatol       Date:  1996-06       Impact factor: 25.083

7.  Genotyping of hepatitis B virus by restriction pattern analysis of a pre-S amplicon.

Authors:  M Lindh; J E Gonzalez; G Norkrans; P Horal
Journal:  J Virol Methods       Date:  1998-06       Impact factor: 2.014

8.  Quantification of hepatitis B virus DNA over a wide range from serum for studying viral replicative activity in response to treatment and in recurrent infection.

Authors:  M Ranki; H M Schätzl; R Zachoval; M Uusi-Oukari; P Lehtovaara
Journal:  Hepatology       Date:  1995-06       Impact factor: 17.425

9.  A one-year trial of lamivudine for chronic hepatitis B. Asia Hepatitis Lamivudine Study Group.

Authors:  C L Lai; R N Chien; N W Leung; T T Chang; R Guan; D I Tai; K Y Ng; P C Wu; J C Dent; J Barber; S L Stephenson; D F Gray
Journal:  N Engl J Med       Date:  1998-07-09       Impact factor: 91.245

10.  Quantitative PCR for hepatitis B virus with colorimetric detection.

Authors:  P Lehtovaara; M Uusi-Oukari; P Buchert; M Laaksonen; M Bengtström; M Ranki
Journal:  PCR Methods Appl       Date:  1993-12
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  27 in total

1.  A multicenter study evaluation of the digene hybrid capture II signal amplification technique for detection of hepatitis B virus DNA in serum samples and testing of EUROHEP standards.

Authors:  H G Niesters; M Krajden; L Cork; M de Medina; M Hill; E Fries; A D Osterhaus
Journal:  J Clin Microbiol       Date:  2000-06       Impact factor: 5.948

2.  Identification of different states of hepatitis B virus infection with a quantitative PCR assay.

Authors:  H H Kessler; S Preininger; E Stelzl; E Daghofer; B I Santner; E Marth; H Lackner; R E Stauber
Journal:  Clin Diagn Lab Immunol       Date:  2000-03

3.  Evaluation of the COBAS TaqMan 48 real-time PCR system for quantitation of hepatitis B virus DNA.

Authors:  Rafael M Gordillo; Juan Gutiérrez; Manuel Casal
Journal:  J Clin Microbiol       Date:  2005-07       Impact factor: 5.948

4.  Lamivudine resistance of hepatitis B virus masked by coemergence of mutations in probe region of the COBAS AMPLICOR assay.

Authors:  Magnus Lindh; Charles Hannoun; Sebastian Malmström; Johan Lindberg; Gunnar Norkrans
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

5.  Comparative evaluation of semiautomated COBAS AMPLICOR hepatitis B virus (HBV) monitor test and manual microwell plate-based AMPLICOR HBV MONITOR test.

Authors:  I J Marin; M Poljak; K Seme; J Meglic-Volkar; M Maticic; G Lesnicar; V Brinovec
Journal:  J Clin Microbiol       Date:  2001-02       Impact factor: 5.948

6.  Sensitive enzyme immunoassay for hepatitis B virus core-related antigens and their correlation to virus load.

Authors:  Tatsuji Kimura; Akinori Rokuhara; Yoko Sakamoto; Shintaro Yagi; Eiji Tanaka; Kendo Kiyosawa; Noboru Maki
Journal:  J Clin Microbiol       Date:  2002-02       Impact factor: 5.948

7.  Dynamic range and reproducibility of hepatitis B virus (HBV) DNA detection and quantification by Cobas Taqman HBV, a real-time semiautomated assay.

Authors:  Magnus Lindh; Charles Hannoun
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

8.  Assessment of the COBAS Amplicor HBV Monitor Test for quantitation of serum hepatitis B virus DNA levels.

Authors:  Vincent A Lopez; Eric J Bourne; Michael W Lutz; Lynn D Condreay
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

9.  Simultaneous quantification and genotyping of hepatitis B virus for genotypes A to G by real-time PCR and two-step melting curve analysis.

Authors:  Wen-Chun Liu; Masashi Mizokami; Maria Buti; Magnus Lindh; Kung-Chia Young; Koun-Tem Sun; Yun-Chan Chi; Hsi-Hsien Li; Ting-Tsung Chang
Journal:  J Clin Microbiol       Date:  2006-10-04       Impact factor: 5.948

10.  New enzyme immunoassay for detection of hepatitis B virus core antigen (HBcAg) and relation between levels of HBcAg and HBV DNA.

Authors:  Tatsuji Kimura; Akinori Rokuhara; Akihiro Matsumoto; Shintaro Yagi; Eiji Tanaka; Kendo Kiyosawa; Noboru Maki
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

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