Literature DB >> 10425771

Taxonomic characterization of denitrifying bacteria that degrade aromatic compounds and description of Azoarcus toluvorans sp. nov. and Azoarcus toluclasticus sp. nov.

B Song1, M M Häggblom, J Zhou, J M Tiedje, N J Palleroni.   

Abstract

A taxonomic characterization of twenty-one strains capable of degrading aromatic compounds under denitrifying conditions, isolated from ten different geographical locations, was performed on the basis of general morphological and physiological characteristics, cellular fatty acids, DNA base composition, small ribosomal (16S) subunit DNA sequences, whole-cell protein patterns and genomic DNA fragmentation analysis, in addition to DNA similarity estimations using hybridization methods. The collection of strains was subdivided into a number of different groups. A first group, consisting of four strains, could be assigned to the previously described species Azoarcus tolulyticus. A second group (five strains) had DNA which reannealed highly to that of strains of the first group, and it is considered to represent a genomovar of A. tolulyticus. The third and fourth groups, composed of a total of five strains, represent a new species of Azoarcus, Azoarcus toluclasticus (group 3) and a genomovar of this species (group 4), respectively. Finally, the fifth group, with two strains, corresponds to another new species of the genus Azoarcus, Azoarcus toluvorans. In addition to these five groups, the collection includes five individual strains perhaps representing as many different new species. The above classification is partially consistent with the results of approaches other than DNA-DNA hybridization (electrophoretic patterns of whole-cell proteins and of the fragments obtained after digestion of total DNA with infrequently cutting restriction enzymes). On the other hand, no correlation of these groupings was found in terms of the cellular fatty acid composition. It is also unfortunate that no simple sets of easily determinable phenotypic properties could be defined as being characteristic of each of the groups.

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Year:  1999        PMID: 10425771     DOI: 10.1099/00207713-49-3-1129

Source DB:  PubMed          Journal:  Int J Syst Bacteriol        ISSN: 0020-7713


  16 in total

1.  Enrichment of members of the family Geobacteraceae associated with stimulation of dissimilatory metal reduction in uranium-contaminated aquifer sediments.

Authors:  Dawn E Holmes; Kevin T Finneran; Regina A O'Neil; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2002-05       Impact factor: 4.792

2.  Polyphasic analysis of an Azoarcus-Leptothrix-dominated bacterial biofilm developed on stainless steel surface in a gasoline-contaminated hypoxic groundwater.

Authors:  Tibor Benedek; András Táncsics; István Szabó; Milán Farkas; Sándor Szoboszlay; Krisztina Fábián; Gergely Maróti; Balázs Kriszt
Journal:  Environ Sci Pollut Res Int       Date:  2016-01-29       Impact factor: 4.223

3.  Biophysical controls on community succession in stream biofilms.

Authors:  Katharina Besemer; Gabriel Singer; Romana Limberger; Ann-Kathrin Chlup; Gerald Hochedlinger; Iris Hödl; Christian Baranyi; Tom J Battin
Journal:  Appl Environ Microbiol       Date:  2007-06-08       Impact factor: 4.792

4.  Anaerobic activation of p-cymene in denitrifying betaproteobacteria: methyl group hydroxylation versus addition to fumarate.

Authors:  Annemieke Strijkstra; Kathleen Trautwein; René Jarling; Lars Wöhlbrand; Marvin Dörries; Richard Reinhardt; Marta Drozdowska; Bernard T Golding; Heinz Wilkes; Ralf Rabus
Journal:  Appl Environ Microbiol       Date:  2014-09-26       Impact factor: 4.792

5.  Isolation and characterization of a new denitrifying spirillum capable of anaerobic degradation of phenol.

Authors:  Y Shinoda; Y Sakai; M Ué; A Hiraishi; N Kato
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

6.  Vertical Distribution of Denitrification Potential, Denitrifying Bacteria, and Benzoate Utilization in Intertidal Microbial Mat Communities.

Authors:  D.S. Golet; B.B. Ward
Journal:  Microb Ecol       Date:  2001-07       Impact factor: 4.552

Review 7.  Biology of Pseudomonas stutzeri.

Authors:  Jorge Lalucat; Antoni Bennasar; Rafael Bosch; Elena García-Valdés; Norberto J Palleroni
Journal:  Microbiol Mol Biol Rev       Date:  2006-06       Impact factor: 11.056

8.  In situ expression of nifD in Geobacteraceae in subsurface sediments.

Authors:  Dawn E Holmes; Kelly P Nevin; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

9.  The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB.

Authors:  María J López Barragán; Manuel Carmona; María T Zamarro; Bärbel Thiele; Matthias Boll; Georg Fuchs; José L García; Eduardo Díaz
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

10.  Aerobic and anaerobic toluene degradation by a newly isolated denitrifying bacterium, Thauera sp. strain DNT-1.

Authors:  Yoshifumi Shinoda; Yasuyoshi Sakai; Hiroshi Uenishi; Yasumitsu Uchihashi; Akira Hiraishi; Hideaki Yukawa; Hiroya Yurimoto; Nobuo Kato
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

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