Literature DB >> 10425036

Cystic fibrosis patients with the 3272-26A-->G mutation have mild disease, leaky alternative mRNA splicing, and CFTR protein at the cell membrane.

S Beck1, D Penque, S Garcia, A Gomes, C Farinha, L Mata, S Gulbenkian, K Gil-Ferreira, A Duarte, P Pacheco, C Barreto, B Lopes, J Cavaco, J Lavinha, M D Amaral.   

Abstract

We characterized the 3272-26A-->G mutation in the cystic fibrosis transmembrane conductance regulator (CFTR) gene, creating an alternative acceptor splice site in intron 17a, that competes with the normal one, although we predict from consensus values, with lower efficiency. We analyzed five Cystic Fibrosis (CF) Portuguese patients with the 3272-26A-->G/F508del genotype. Besides clinical and haplotype characterization of those patients, we report here results from CFTR transcript analysis in nasal brushings from all five patients. RT-PCR analysis supports alternative splicing in all patients and carriers, but not in controls. By sequencing, we determined that the alternative transcript includes 25 nucleotides from intron 17a, which predictively cause frameshift and a premature stop codon. The use of this alternative splice site causes a reduction in the levels of normal transcripts from the allele with this mutation and, most probably, of normal protein as well. By immunocytochemistry of both epithelial primary cell cultures and slices from CF polyps, CFTR protein is detected at the cell membrane, with three different antibodies. Ussing chamber analysis of one nasal polyp shows a high sodium absorption, characteristic of CF. Altogether, the results suggest that the main defect caused by the 3272-26A-->G mutation is a reduction in normal CFTR transcripts and protein and therefore this mutation should be included in class V, according to Zielenski and Tsui. Copyright 1999 Wiley-Liss, Inc.

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Year:  1999        PMID: 10425036     DOI: 10.1002/(SICI)1098-1004(1999)14:2<133::AID-HUMU5>3.0.CO;2-T

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  22 in total

1.  MAASE: an alternative splicing database designed for supporting splicing microarray applications.

Authors:  Christina L Zheng; Young-Soo Kwon; Hai-Ri Li; Kui Zhang; Gabriela Coutinho-Mansfield; Canzhu Yang; T Murlidharan Nair; Michael Gribskov; Xiang-Dong Fu
Journal:  RNA       Date:  2005-10-26       Impact factor: 4.942

2.  Therapeutic potential and mechanism of kinetin as a treatment for the human splicing disease familial dysautonomia.

Authors:  Matthew M Hims; El Chérif Ibrahim; Maire Leyne; James Mull; Lijuan Liu; Conxi Lazaro; Ranjit S Shetty; Sandra Gill; James F Gusella; Robin Reed; Susan A Slaugenhaupt
Journal:  J Mol Med (Berl)       Date:  2007-01-06       Impact factor: 4.599

3.  Assessing the residual CFTR gene expression in human nasal epithelium cells bearing CFTR splicing mutations causing cystic fibrosis.

Authors:  Laia Masvidal; Susana Igreja; Maria D Ramos; Antoni Alvarez; Javier de Gracia; Anabela Ramalho; Margarida D Amaral; Sara Larriba; Teresa Casals
Journal:  Eur J Hum Genet       Date:  2013-10-16       Impact factor: 4.246

4.  Predicting gene structure changes resulting from genetic variants via exon definition features.

Authors:  William H Majoros; Carson Holt; Michael S Campbell; Doreen Ware; Mark Yandell; Timothy E Reddy
Journal:  Bioinformatics       Date:  2018-11-01       Impact factor: 6.937

5.  Specific correction of a splice defect in brain by nutritional supplementation.

Authors:  Ranjit S Shetty; Cary S Gallagher; Yei-Tsung Chen; Matthew M Hims; James Mull; Maire Leyne; James Pickel; David Kwok; Susan A Slaugenhaupt
Journal:  Hum Mol Genet       Date:  2011-08-05       Impact factor: 6.150

Review 6.  The molecular basis of familial dysautonomia: overview, new discoveries and implications for directed therapies.

Authors:  Berish Y Rubin; Sylvia L Anderson
Journal:  Neuromolecular Med       Date:  2007-11-06       Impact factor: 3.843

7.  A novel double deletion underscores the importance of characterizing end points of the CFTR large rearrangements.

Authors:  Magali Taulan; Caroline Guittard; Corinne Theze; Mireille Claustres; Marie des Georges
Journal:  Eur J Hum Genet       Date:  2009-05-13       Impact factor: 4.246

8.  Minigene assay to Evaluate CRISPR/Cas9-based excision of Intronic mutations that Cause Aberrant Splicing in Human Cells.

Authors:  David J Sanz; Patrick T Harrison
Journal:  Bio Protoc       Date:  2019-06-05

9.  Health Characteristics of Patients with Cystic Fibrosis whose Genotype Includes a Variant of the Nucleotide Sequence c.3140-16T>A and Functional Analysis of this Variant.

Authors:  Elena Kondratyeva; Tatyana Bukharova; Anna Efremova; Yuliya Melyanovskaya; Natalia Bulatenko; Ksenia Davydenko; Alexandra Filatova; Mikhail Skoblov; Stanislav Krasovsky; Nika Petrova; Alexander Polyakov; Tagui Adyan; Elena Amelina; Vera Shadrina; Elena Zhekaite; Aysa Zodbinova; Alexander Chernyak; Rena Zinchenko; Sergei Kutsev; Dmitry Goldshtein
Journal:  Genes (Basel)       Date:  2021-05-28       Impact factor: 4.096

Review 10.  Cystic Fibrosis Human Organs-on-a-Chip.

Authors:  Herbert Luke Ogden; Hoyeol Kim; Kathryn A Wikenheiser-Brokamp; Anjaparavanda P Naren; Kyu Shik Mun
Journal:  Micromachines (Basel)       Date:  2021-06-25       Impact factor: 2.891

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