Literature DB >> 10409821

Macromolecular impurities and disorder in protein crystals.

C L Caylor1, I Dobrianov, S G Lemay, C Kimmer, S Kriminski, K D Finkelstein, W Zipfel, W W Webb, B R Thomas, A A Chernov, R E Thorne.   

Abstract

The mechanisms by which macromolecular impurities degrade the diffraction properties of protein crystals have been investigated using X-ray topography, high-resolution diffraction line shape measurements, crystallographic data collection, chemical analysis, and two-photon excitation fluorescence microscopy. Hen egg-white lysozyme crystals grown from solutions containing a structurally unrelated protein (ovotransferrin) and a related protein (turkey egg-white lysozyme) can exhibit significantly broadened mosaicity due to formation of cracks and dislocations but have overall B factors and diffraction resolutions comparable to those of crystals grown from uncontaminated lysozyme. Direct fluorescence imaging of the three-dimensional impurity distribution shows that impurities incorporate with different densities in sectors formed by growth on different crystal faces, and that impurity densities in the crystal core and along boundaries between growth sectors can be much larger than in other parts of the crystal. These nonuniformities create stresses that drive formation of the defects responsible for the mosaic broadening. Our results provide a rationale for the use of seeding to obtain high-quality crystals from heavily contaminated solutions and have implications for the use of crystallization for protein purification. Proteins 1999;36:270-281. Copyright 1999 Wiley-Liss, Inc.

Entities:  

Mesh:

Substances:

Year:  1999        PMID: 10409821

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  13 in total

Review 1.  Diamonds in the rough: protein crystals from a formulation perspective.

Authors:  A Jen; H P Merkle
Journal:  Pharm Res       Date:  2001-11       Impact factor: 4.200

2.  Crystallization mechanisms of hemoglobin C in the R state.

Authors:  Angela R Feeling-Taylor; S-T Yau; Dimiter N Petsev; Ronald L Nagel; Rhoda Elison Hirsch; Peter G Vekilov
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

3.  Crystallization and structural analysis of GADPH from Spinacia oleracea in a new form.

Authors:  Ana Cámara-Artigas; Masakazu Hirasawa; David B Knaff; Meitian Wang; James P Allen
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-10-25

4.  Initial crystallographic studies of a small heat-shock protein from Xylella fastidiosa.

Authors:  Susely F S Tada; Antonio Marcos Saraiva; Gabriela S Lorite; Luciana K Rosselli-Murai; Alexandre César Pelloso; Marcelo Leite dos Santos; Daniela B B Trivella; Mônica A Cotta; Anete Pereira de Souza; Ricardo Aparicio
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-04-20

5.  Two-step purification of outer membrane proteins.

Authors:  Konstantinos Beis; Chris Whitfield; Ian Booth; James H Naismith
Journal:  Int J Biol Macromol       Date:  2006-01-19       Impact factor: 6.953

6.  Phase-diagram-guided method for growth of a large crystal of glycoside hydrolase family 45 inverting cellulase suitable for neutron structural analysis.

Authors:  Akihiko Nakamura; Takuya Ishida; Shinya Fushinobu; Katsuhiro Kusaka; Ichiro Tanaka; Koji Inaka; Yoshiki Higuchi; Mika Masaki; Kazunori Ohta; Satoshi Kaneko; Nobuo Niimura; Kiyohiko Igarashi; Masahiro Samajima
Journal:  J Synchrotron Radiat       Date:  2013-09-25       Impact factor: 2.616

7.  Stubborn contaminants: influence of detergents on the purity of the multidrug ABC transporter BmrA.

Authors:  Benjamin Wiseman; Arnaud Kilburg; Vincent Chaptal; Gina Catalina Reyes-Mejia; Jonathan Sarwan; Pierre Falson; Jean-Michel Jault
Journal:  PLoS One       Date:  2014-12-17       Impact factor: 3.240

8.  Automated refinement of macromolecular structures at low resolution using prior information.

Authors:  Oleg Kovalevskiy; Robert A Nicholls; Garib N Murshudov
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-09-30       Impact factor: 7.652

9.  Effects of impurities on membrane-protein crystallization in different systems.

Authors:  Christopher A Kors; Ellen Wallace; Douglas R Davies; Liang Li; Philip D Laible; Peter Nollert
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-09-16

10.  Radiation damage in a micron-sized protein crystal studied via reciprocal space mapping and Bragg coherent diffractive imaging.

Authors:  H D Coughlan; C Darmanin; N W Phillips; F Hofmann; J N Clark; R J Harder; D J Vine; B Abbey
Journal:  Struct Dyn       Date:  2015-04-29       Impact factor: 2.920

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.