Literature DB >> 10408643

The effects of polyols on the thermal stability of calf thymus DNA.

P Del Vecchio1, D Esposito, L Ricchi, G Barone.   

Abstract

The effects on thermal denaturation of calf thymus DNA (ct-DNA) and its conformational changes induced by the presence in solution of different polyols, namely glycerol, i-erytritol, L( -- ) and D( + ) arabitol, D-mannitol, D-sorbitol and myo-inositol, have been investigated by means of differential scanning calorimetry (DSC) and circular dichroism (CD). By increasing the concentration of these additives a decrease in both the denaturation enthalpy (deltadH) and temperature of the maximum of the denaturation peak (Tmax) of DNA is observed. The values of these thermodynamic parameters depend on both the nature and concentration of the solute. The overall destabilization of DNA molecule has been related to the different capability of polyhydric alcohols to interact with the polynucleotide solvation sites replacing water and to the modification of the electrostatic interactions between the polynucleotide and its surrounding atmosphere of counterions. The particular behaviour of L( -- ) arabitol, which showed a much greater destabilizing ability compared to the other polyols, was further investigated and attributed to a direct more effective interaction with the double helix of DNA. CD spectra showed only a slight alteration of DNA-B structure in the presence of all the molecules here studied, except for L( -- ) arabitol where the DNA molecule seems to undergo a meaningful conformational change. The salt concentration dependence of DNA thermal stability in the presence of L( -- ) arabitol indicates a conformational change of polynucleotide towards a more extended conformation.

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Year:  1999        PMID: 10408643     DOI: 10.1016/s0141-8130(99)00058-6

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  4 in total

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2.  DNA-binding studies of the natural β-carboline eudistomin U.

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Journal:  Bioorg Med Chem Lett       Date:  2016-08-18       Impact factor: 2.823

3.  Polarizable empirical force field for acyclic polyalcohols based on the classical Drude oscillator.

Authors:  Xibing He; Pedro E M Lopes; Alexander D Mackerell
Journal:  Biopolymers       Date:  2013-10       Impact factor: 2.505

4.  Cholinium-based Good's buffers ionic liquids as remarkable stabilizers and recyclable preservation media for recombinant small RNAs.

Authors:  Augusto Q Pedro; Patrícia Pereira; Maria J Quental; André P Carvalho; Sérgio M Santos; João A Queiroz; Fani Sousa; Mara G Freire
Journal:  ACS Sustain Chem Eng       Date:  2018-11-08       Impact factor: 8.198

  4 in total

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