Literature DB >> 10400604

Methanobacterium thermoautotrophicum RNA polymerase and transcription in vitro.

T J Darcy1, W Hausner, D E Awery, A M Edwards, M Thomm, J N Reeve.   

Abstract

RNA polymerase (RNAP) purified from Methanobacterium thermoautotrophicum DeltaH has been shown to initiate transcription accurately in vitro from the hmtB archaeal histone promoter with either native or recombinant forms of the M. thermoautotrophicum TATA-binding protein and transcription factor TFB. Efforts to obtain transcription initiation from hydrogen-regulated methane gene promoters were, however, unsuccessful. Two previously unrecognized archaeal RNAP subunits have been identified, and complex formation by the M. thermoautotrophicum RNAP and TFB has been demonstrated.

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Year:  1999        PMID: 10400604      PMCID: PMC93948     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  23 in total

1.  Two transcription factors related with the eucaryal transcription factors TATA-binding protein and transcription factor IIB direct promoter recognition by an archaeal RNA polymerase.

Authors:  W Hausner; J Wettach; C Hethke; M Thomm
Journal:  J Biol Chem       Date:  1996-11-22       Impact factor: 5.157

2.  Transcription in archaea: similarity to that in eucarya.

Authors:  D Langer; J Hain; P Thuriaux; W Zillig
Journal:  Proc Natl Acad Sci U S A       Date:  1995-06-20       Impact factor: 11.205

3.  Transcriptional regulation: contending with complexity.

Authors:  F C Holstege; R A Young
Journal:  Proc Natl Acad Sci U S A       Date:  1999-01-05       Impact factor: 11.205

4.  Specific transcription of cloned Methanobacterium thermoautotrophicum transcription units by homologous RNA polymerase in vitro.

Authors:  S Knaub; A Klein
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

5.  DNA-dependent RNA polymerases of the three orders of methanogens.

Authors:  M Thomm; J Madon; K O Stetter
Journal:  Biol Chem Hoppe Seyler       Date:  1986-06

6.  Promoter recognition in archaea is mediated by transcription factors: identification of transcription factor aTFB from Methanococcus thermolithotrophicus as archaeal TATA-binding protein.

Authors:  H P Gohl; B Gröndahl; M Thomm
Journal:  Nucleic Acids Res       Date:  1995-10-11       Impact factor: 16.971

7.  HMt, a histone-related protein from Methanobacterium thermoautotrophicum delta H.

Authors:  R Tabassum; K M Sandman; J N Reeve
Journal:  J Bacteriol       Date:  1992-12       Impact factor: 3.490

8.  Two dissociable subunits of yeast RNA polymerase II stimulate the initiation of transcription at a promoter in vitro.

Authors:  A M Edwards; C M Kane; R A Young; R D Kornberg
Journal:  J Biol Chem       Date:  1991-01-05       Impact factor: 5.157

9.  Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.

Authors:  C J Bult; O White; G J Olsen; L Zhou; R D Fleischmann; G G Sutton; J A Blake; L M FitzGerald; R A Clayton; J D Gocayne; A R Kerlavage; B A Dougherty; J F Tomb; M D Adams; C I Reich; R Overbeek; E F Kirkness; K G Weinstock; J M Merrick; A Glodek; J L Scott; N S Geoghagen; J C Venter
Journal:  Science       Date:  1996-08-23       Impact factor: 47.728

10.  Four subunits that are shared by the three classes of RNA polymerase are functionally interchangeable between Homo sapiens and Saccharomyces cerevisiae.

Authors:  G V Shpakovski; J Acker; M Wintzerith; J F Lacroix; P Thuriaux; M Vigneron
Journal:  Mol Cell Biol       Date:  1995-09       Impact factor: 4.272

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  26 in total

Review 1.  Archaebacteria then ... Archaes now (are there really no archaeal pathogens?).

Authors:  J N Reeve
Journal:  J Bacteriol       Date:  1999-06       Impact factor: 3.490

2.  Crystal structure of RPB5, a universal eukaryotic RNA polymerase subunit and transcription factor interaction target.

Authors:  F Todone; R O Weinzierl; P Brick; S Onesti
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

3.  Zinc-bundle structure of the essential RNA polymerase subunit RPB10 from Methanobacterium thermoautotrophicum.

Authors:  C D Mackereth; C H Arrowsmith; A M Edwards; L P McIntosh
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

4.  The complete genome of the crenarchaeon Sulfolobus solfataricus P2.

Authors:  Q She; R K Singh; F Confalonieri; Y Zivanovic; G Allard; M J Awayez; C C Chan-Weiher; I G Clausen; B A Curtis; A De Moors; G Erauso; C Fletcher; P M Gordon; I Heikamp-de Jong; A C Jeffries; C J Kozera; N Medina; X Peng; H P Thi-Ngoc; P Redder; M E Schenk; C Theriault; N Tolstrup; R L Charlebois; W F Doolittle; M Duguet; T Gaasterland; R A Garrett; M A Ragan; C W Sensen; J Van der Oost
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-26       Impact factor: 11.205

5.  Evolution of eukaryotic transcription: insights from the genome of Giardia lamblia.

Authors:  Aaron A Best; Hilary G Morrison; Andrew G McArthur; Mitchell L Sogin; Gary J Olsen
Journal:  Genome Res       Date:  2004-08       Impact factor: 9.043

6.  Selective depletion of Sulfolobus solfataricus transcription factor E under heat shock conditions.

Authors:  Junaid Iqbal; Sohail A Qureshi
Journal:  J Bacteriol       Date:  2010-04-02       Impact factor: 3.490

7.  Regulation of tryptophan operon expression in the archaeon Methanothermobacter thermautotrophicus.

Authors:  Yunwei Xie; John N Reeve
Journal:  J Bacteriol       Date:  2005-09       Impact factor: 3.490

8.  TFB1 or TFB2 is sufficient for Thermococcus kodakaraensis viability and for basal transcription in vitro.

Authors:  Thomas J Santangelo; L'ubomíra Cubonová; Cindy L James; John N Reeve
Journal:  J Mol Biol       Date:  2006-12-30       Impact factor: 5.469

9.  An Rpb4/Rpb7-like complex in yeast RNA polymerase III contains the orthologue of mammalian CGRP-RCP.

Authors:  Magali Siaut; Cécile Zaros; Emilie Levivier; Maria-Laura Ferri; Magali Court; Michel Werner; Isabelle Callebaut; Pierre Thuriaux; André Sentenac; Christine Conesa
Journal:  Mol Cell Biol       Date:  2003-01       Impact factor: 4.272

10.  Novel domains and orthologues of eukaryotic transcription elongation factors.

Authors:  Chris P Ponting
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

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