Literature DB >> 10397799

Novel RNA-binding motif: the KH module.

S Adinolfi1, C Bagni, M A Castiglione Morelli, F Fraternali, G Musco, A Pastore.   

Abstract

The KH motif has recently been identified in single or multiple copies in a number of RNA associated proteins. Here we review the current knowledge accumulated about the sequence, structure, and functions of the KH. The multidomain architecture of most of the KH-containing proteins inspired an approach based on the production of peptides spanning the sequence of an isolated KH motif. Correct identification of the minimal length necessary for producing a folded peptide has had a number of important consequences for interpreting functional data. The presence of the KH motifs in fmr1, the protein responsible for the fragile X syndrome, and their possible role in the fmr1 functions are also discussed. Copyright 1999 John Wiley & Sons, Inc.

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Year:  1999        PMID: 10397799     DOI: 10.1002/(SICI)1097-0282(1999)51:2<153::AID-BIP5>3.0.CO;2-6

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  21 in total

1.  Gene expression profiling of embryo-derived stem cells reveals candidate genes associated with pluripotency and lineage specificity.

Authors:  Tetsuya S Tanaka; Tilo Kunath; Wendy L Kimber; Saied A Jaradat; Carole A Stagg; Masayuki Usuda; Takashi Yokota; Hitoshi Niwa; Janet Rossant; Minoru S H Ko
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

2.  The KH domains of Xenopus Vg1RBP mediate RNA binding and self-association.

Authors:  Anna Git; Nancy Standart
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

3.  Dim2p, a KH-domain protein required for small ribosomal subunit synthesis.

Authors:  Emmanuel Vanrobays; Jean-Paul Gélugne; Michèle Caizergues-Ferrer; Denis L J Lafontaine
Journal:  RNA       Date:  2004-04       Impact factor: 4.942

4.  Solution structure of the carbon storage regulator protein CsrA from Escherichia coli.

Authors:  Pablo Gutiérrez; Yan Li; Michael J Osborne; Ekaterina Pomerantseva; Qian Liu; Kalle Gehring
Journal:  J Bacteriol       Date:  2005-05       Impact factor: 3.490

5.  Distinct poly(rC) binding protein KH domain determinants for poliovirus translation initiation and viral RNA replication.

Authors:  Brandon L Walter; Todd B Parsley; Ellie Ehrenfeld; Bert L Semler
Journal:  J Virol       Date:  2002-12       Impact factor: 5.103

6.  Formation of an alphaCP1-KH3 complex with UC-rich RNA.

Authors:  M Sidiqi; J A Wilce; C J Porter; A Barker; P J Leedman; M C J Wilce
Journal:  Eur Biophys J       Date:  2005-03-09       Impact factor: 1.733

7.  Inactivation of the ybdD gene in Lactococcus lactis increases the amounts of exported proteins.

Authors:  E Morello; S Nouaille; N G Cortes-Perez; S Blugeon; L F C Medina; V Azevedo; J J Gratadoux; L G Bermúdez-Humarán; Y Le Loir; P Langella
Journal:  Appl Environ Microbiol       Date:  2012-07-27       Impact factor: 4.792

8.  A new Arabidopsis gene, FLK, encodes an RNA binding protein with K homology motifs and regulates flowering time via FLOWERING LOCUS C.

Authors:  Mi-Hye Lim; Joonki Kim; Youn-Sung Kim; Kyung-Sook Chung; Yeon-Hee Seo; Ilha Lee; Jungmook Kim; Choo Bong Hong; Hie-Joon Kim; Chung-Mo Park
Journal:  Plant Cell       Date:  2004-02-18       Impact factor: 11.277

9.  Regulation of flowering time in Arabidopsis by K homology domain proteins.

Authors:  Todd C Mockler; Xuhong Yu; Dror Shalitin; Dhavan Parikh; Todd P Michael; Jasmine Liou; Jie Huang; Zachery Smith; Jose M Alonso; Joseph R Ecker; Joanne Chory; Chentao Lin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-13       Impact factor: 11.205

10.  SPIN1, a K homology domain protein negatively regulated and ubiquitinated by the E3 ubiquitin ligase SPL11, is involved in flowering time control in rice.

Authors:  Miguel E Vega-Sánchez; Lirong Zeng; Songbiao Chen; Hei Leung; Guo-Liang Wang
Journal:  Plant Cell       Date:  2008-06-27       Impact factor: 11.277

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